DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
DRSKLRSVS
Uniprot ID:
Q9Y5X3
Source protein:
Sorting nexin-5
Source gene:
SNX5
Class:
DEG_APCC_DBOX_1
Location:
14:22
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.8133
ASA_SCORE:
98
COIL:
0.6436
CONS_SCORE:
0.2957
DSS_SCORE:
0.4508
HELIX:
0.3106
FCONS_SCORE:
0.8718
RIG_SCORE:
0.7234
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.Q11E
TCGA-CM-4743
COAD
TCGA
DRSKLRSVS
DEG_APCC_DBOX_1
0.25
p.Q11E
DO8103
COAD
ICGC
DRSKLRSVS
DEG_APCC_DBOX_1
0.25
p.P5S
DO2593
BRCA
ICGC
DRSKLRSVS
DEG_APCC_DBOX_1
0.0833
p.L18M
DO228974
LICA
ICGC
DRSKLRSVS
DEG_APCC_DBOX_1
0.711
p.E12Q
DO27120
LUSC
ICGC
DRSKLRSVS
DEG_APCC_DBOX_1
0.2778
p.A21V
DO52682
MALY
ICGC
DRSKLRSVS
DEG_APCC_DBOX_1
0.6936
p.E6D
DO52675
MALY
ICGC
DRSKLRSVS
DEG_APCC_DBOX_1
0.1111
p.S30L
SIDM01147
Gastric Carcinoma
GDSC
DRSKLRSVS
DEG_APCC_DBOX_1
0.1111
p.S30L
ACH-000427
Gastric Cancer
CCLE
DRSKLRSVS
DEG_APCC_DBOX_1
0.1111
p.S30L
NCI-N87
stomach
COSMIC
DRSKLRSVS
DEG_APCC_DBOX_1
0.1111
Drug responses associated with SNX5 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of DRSKLRSVS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9Y5X3
Sorting nexin-5
DEG_APCC_DBOX_1
14:22
DRSKLRSVS
APC,CDC20,FZR1
0.8133
More...