DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
DRTSLSSVG
Uniprot ID:
Q7Z401
Source protein:
C-myc promoter-binding protein
Source gene:
DENND4A
Class:
DEG_APCC_DBOX_1
Location:
1354:1362
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9948
ASA_SCORE:
65.1667
COIL:
0.8093
CONS_SCORE:
0.2933
DSS_SCORE:
0.5849
HELIX:
0.1313
FCONS_SCORE:
1.0359
RIG_SCORE:
0.6448
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S1348P
TCGA-AJ-A3EL
UCEC
TCGA
DRTSLSSVG
DEG_APCC_DBOX_1
0.1667
p.S1348P
DO41542
UCEC
ICGC
DRTSLSSVG
DEG_APCC_DBOX_1
0.1667
p.D1352H
TCGA-DK-A3IS
BLCA
TCGA
DRTSLSSVG
DEG_APCC_DBOX_1
0.2778
p.D1352H
DO566
BLCA
ICGC
DRTSLSSVG
DEG_APCC_DBOX_1
0.2778
p.V1361A
TCGA-EE-A29H
SKCM
TCGA
DRTSLSSVG
DEG_APCC_DBOX_1
0.6936
p.K1358T
TCGA-FU-A3HZ
CESC
TCGA
DRTSLSSVG
DEG_APCC_DBOX_1
0.7306
p.F1367L
TCGA-GN-A26A
SKCM
TCGA
DRTSLSSVG
DEG_APCC_DBOX_1
0.1944
p.P1357T
DO229035
LICA
ICGC
DRTSLSSVG
DEG_APCC_DBOX_1
0.7031
p.T1356N
DO229045
LICA
ICGC
DRTSLSSVG
DEG_APCC_DBOX_1
0.5944
p.S1359C
DO25867
LUAD
ICGC
DRTSLSSVG
DEG_APCC_DBOX_1
0.643
p.S1359C
ACH-000500
Head and Neck Cancer
CCLE
DRTSLSSVG
DEG_APCC_DBOX_1
0.643
p.R1355C
DO37406
SKCM
ICGC
DRTSLSSVG
DEG_APCC_DBOX_1
0.8301
p.R1355C
DO50301
SKCM
ICGC
DRTSLSSVG
DEG_APCC_DBOX_1
0.8301
p.R1355C
ACH-000953
Leukemia
CCLE
DRTSLSSVG
DEG_APCC_DBOX_1
0.8301
p.R1355C
SUP-T1
haematopoietic_and_lymphoid_tissue
COSMIC
DRTSLSSVG
DEG_APCC_DBOX_1
0.8301
p.H1344Y
SIDM00206
Glioblastoma
GDSC
DRTSLSSVG
DEG_APCC_DBOX_1
0.5
p.H1344Y
SIDM00836
Colorectal Carcinoma
GDSC
DRTSLSSVG
DEG_APCC_DBOX_1
0.5
p.L1359I
SIDM00893
Breast Carcinoma
GDSC
DRTSLSSVG
DEG_APCC_DBOX_1
0.7174
p.L1359I
BT-20
breast
COSMIC
DRTSLSSVG
DEG_APCC_DBOX_1
0.7174
p.L1360I
BT-20
breast
COSMIC
DRTSLSSVG
DEG_APCC_DBOX_1
0.7174
Drug responses associated with DENND4A mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of DRTSLSSVG
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q7Z401
C-myc promoter-binding protein
DEG_APCC_DBOX_1
1354:1362
DRTSLSSVG
APC,CDC20,FZR1
0.9948
More...