DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
DSENTPVK
Uniprot ID:
Q92922
Source protein:
SWI/SNF complex subunit SMARCC1
Source gene:
SMARCC1
Class:
DEG_SCF_SKP2-CKS1_1
Location:
394:401
E3 ligase:
SKP2,CSK1
DEGRON score:
0.9929
ASA_SCORE:
96.4375
COIL:
0.914
CONS_SCORE:
0.3329
DSS_SCORE:
0.5825
HELIX:
0.0576
FCONS_SCORE:
1.0694
RIG_SCORE:
0.6731
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.K392N
TCGA-BR-8680
STAD
TCGA
DSENTPVK
DEG_SCF_SKP2-CKS1_1
0.2778
p.K392N
DO47769
STAD
ICGC
DSENTPVK
DEG_SCF_SKP2-CKS1_1
0.2778
p.D394Y
TCGA-BS-A0UV
UCEC
TCGA
DSENTPVK
DEG_SCF_SKP2-CKS1_1
0.6214
p.D394Y
DO42793
UCEC
ICGC
DSENTPVK
DEG_SCF_SKP2-CKS1_1
0.6214
p.V400G
TCGA-D9-A6EC
SKCM
TCGA
DSENTPVK
DEG_SCF_SKP2-CKS1_1
0.6421
p.V400G
DO232761
PBCA
ICGC
DSENTPVK
DEG_SCF_SKP2-CKS1_1
0.6421
p.V400G
DO50291
SKCM
ICGC
DSENTPVK
DEG_SCF_SKP2-CKS1_1
0.6421
p.E410K
TCGA-DK-AA71
BLCA
TCGA
DSENTPVK
DEG_SCF_SKP2-CKS1_1
0.0833
p.V400L
DO231987
LICA
ICGC
DSENTPVK
DEG_SCF_SKP2-CKS1_1
0.5654
p.L385I
DO229221
THCA
ICGC
DSENTPVK
DEG_SCF_SKP2-CKS1_1
0.0833
Drug responses associated with SMARCC1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of DSENTPVK
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q92922
SWI/SNF complex subunit SMARCC1
DEG_SCF_SKP2-CKS1_1
394:401
DSENTPVK
SKP2,CSK1
0.9929
More...