DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
DSENTPVK
Uniprot ID:
Q92922
Source protein:
SWI/SNF complex subunit SMARCC1
Source gene:
SMARCC1
Class:
DEG_SCF_SKP2-CKS1_1
Location:
394:401
E3 ligase:
SKP2,CSK1
DEGRON score:
0.9929
ASA_SCORE:
96.4375
COIL:
0.914
CONS_SCORE:
0.3329
DSS_SCORE:
0.5825
HELIX:
0.0576
FCONS_SCORE:
1.0694
RIG_SCORE:
0.6731
Degron related mutations and impact score
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Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.V400G
TCGA-D9-A6EC
SKCM
TCGA
DSENTPVK
DEG_SCF_SKP2-CKS1_1
0.6421
p.V400G
DO232761
PBCA
ICGC
DSENTPVK
DEG_SCF_SKP2-CKS1_1
0.6421
p.V400G
DO50291
SKCM
ICGC
DSENTPVK
DEG_SCF_SKP2-CKS1_1
0.6421
p.D394Y
TCGA-BS-A0UV
UCEC
TCGA
DSENTPVK
DEG_SCF_SKP2-CKS1_1
0.6214
p.D394Y
DO42793
UCEC
ICGC
DSENTPVK
DEG_SCF_SKP2-CKS1_1
0.6214
p.V400L
DO231987
LICA
ICGC
DSENTPVK
DEG_SCF_SKP2-CKS1_1
0.5654
p.K392N
TCGA-BR-8680
STAD
TCGA
DSENTPVK
DEG_SCF_SKP2-CKS1_1
0.2778
p.K392N
DO47769
STAD
ICGC
DSENTPVK
DEG_SCF_SKP2-CKS1_1
0.2778
p.E410K
TCGA-DK-AA71
BLCA
TCGA
DSENTPVK
DEG_SCF_SKP2-CKS1_1
0.0833
p.L385I
DO229221
THCA
ICGC
DSENTPVK
DEG_SCF_SKP2-CKS1_1
0.0833
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Drug responses associated with SMARCC1 mutations
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Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
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All proteins holding degron of DSENTPVK
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Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q92922
SWI/SNF complex subunit SMARCC1
DEG_SCF_SKP2-CKS1_1
394:401
DSENTPVK
SKP2,CSK1
0.9929
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