DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
DSEQTPEK
Uniprot ID:
P51825
Source protein:
AF4/FMR2 family member 1
Source gene:
AFF1
Class:
DEG_SCF_SKP2-CKS1_1
Location:
436:443
E3 ligase:
SKP2,CSK1
DEGRON score:
0.9158
ASA_SCORE:
116.825
COIL:
0.918
CONS_SCORE:
0.4502
DSS_SCORE:
0.9254
HELIX:
0.0701
FCONS_SCORE:
0.8451
RIG_SCORE:
0.5045
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.D441Y
TCGA-CN-A63U
HNSC
TCGA
DSEQTPEK
DEG_SCF_SKP2-CKS1_1
0.7325
p.P452L
TCGA-EB-A85J
SKCM
TCGA
DSEQTPEK
DEG_SCF_SKP2-CKS1_1
0.0833
p.T426M
TCGA-EY-A1G8
UCEC
TCGA
DSEQTPEK
DEG_SCF_SKP2-CKS1_1
0.0556
p.P429L
DO22237
LGG
ICGC
DSEQTPEK
DEG_SCF_SKP2-CKS1_1
0.1389
p.R440S
DO23690
LUAD
ICGC
DSEQTPEK
DEG_SCF_SKP2-CKS1_1
0.7427
p.R440S
DO37146
READ
ICGC
DSEQTPEK
DEG_SCF_SKP2-CKS1_1
0.7427
p.S428F
SIDM02035
Colorectal Carcinoma
GDSC
DSEQTPEK
DEG_SCF_SKP2-CKS1_1
0.1111
Drug responses associated with AFF1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of DSEQTPEK
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P51825
AF4/FMR2 family member 1
DEG_SCF_SKP2-CKS1_1
436:443
DSEQTPEK
SKP2,CSK1
0.9158
More...