DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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CGC
Degron:
DSGCYIS
Uniprot ID:
Q9NSI8
Source protein:
SAM domain-containing protein SAMSN-1
Source gene:
SAMSN1
Class:
DEG_SCF_TRCP1_1
Location:
337:343
E3 ligase:
BTRC
DEGRON score:
0.9648
ASA_SCORE:
28.3286
COIL:
0.6873
CONS_SCORE:
0.9121
DSS_SCORE:
0.5331
HELIX:
0.0974
FCONS_SCORE:
1.2968
RIG_SCORE:
0.6882
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.D340Y
TCGA-95-7567
LUAD
TCGA
DSGCYIS
DEG_SCF_TRCP1_1
0.7325
p.D340N
TCGA-AX-A2HC
UCEC
TCGA
DSGCYIS
DEG_SCF_TRCP1_1
0.6932
p.I344M
TCGA-C4-A0EZ
BLCA
TCGA
DSGCYIS
DEG_SCF_TRCP1_1
0.3056
p.N333S
TCGA-CN-4727
HNSC
TCGA
DSGCYIS
DEG_SCF_TRCP1_1
0.2222
p.E336K
TCGA-D3-A8GI
SKCM
TCGA
DSGCYIS
DEG_SCF_TRCP1_1
0.3056
p.D343Y
TCGA-DK-A6AW
BLCA
TCGA
DSGCYIS
DEG_SCF_TRCP1_1
0.7325
p.I350T
TCGA-EW-A2FW
BRCA
TCGA
DSGCYIS
DEG_SCF_TRCP1_1
0.1389
p.E346D
SIDM00652
Small Cell Lung Carcinoma
GDSC
DSGCYIS
DEG_SCF_TRCP1_1
0.25
p.E346D
NCI-H1105
lung
COSMIC
DSGCYIS
DEG_SCF_TRCP1_1
0.25
p.H348N
SIDM00751
Non-Small Cell Lung Carcinoma
GDSC
DSGCYIS
DEG_SCF_TRCP1_1
0.1944
p.H348N
NCI-H1563
lung
COSMIC
DSGCYIS
DEG_SCF_TRCP1_1
0.1944
p.L330H
SIDM01574
Plasma Cell Myeloma
GDSC
DSGCYIS
DEG_SCF_TRCP1_1
0.1389
p.I344V
SIDM01442
Glioma
GDSC
DSGCYIS
DEG_SCF_TRCP1_1
0.3056
p.D333N
ACH-000984
Endometrial/Uterine Cancer
CCLE
DSGCYIS
DEG_SCF_TRCP1_1
0.2222
p.N328Y
IHH-4
thyroid
COSMIC
DSGCYIS
DEG_SCF_TRCP1_1
0.1944
Drug responses associated with SAMSN1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of DSGCYIS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9NSI8
SAM domain-containing protein SAMSN-1
DEG_SCF_TRCP1_1
337:343
DSGCYIS
BTRC
0.9648
More...