DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
DSGDDS
Uniprot ID:
Q9P1Y6
Source protein:
PHD and RING finger domain-containing protein 1
Source gene:
PHRF1
Class:
DEG_SCF_TRCP1_1
Location:
41:46
E3 ligase:
BTRC
DEGRON score:
0.723
ASA_SCORE:
88.0667
COIL:
0.932
CONS_SCORE:
0.4083
DSS_SCORE:
0.9104
HELIX:
0.0527
FCONS_SCORE:
0.9691
RIG_SCORE:
0.453
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S38N
TCGA-AX-A1CE
UCEC
TCGA
DSGDDS
DEG_SCF_TRCP1_1
0.25
p.D44N
TCGA-BK-A6W3
UCEC
TCGA
DSGDDS
DEG_SCF_TRCP1_1
0.5821
p.D41E
TCGA-D1-A1NZ
UCEC
TCGA
DSGDDS
DEG_SCF_TRCP1_1
0.6758
p.G53V
TCGA-F4-6856
COAD
TCGA
DSGDDS
DEG_SCF_TRCP1_1
0.1389
p.G52V
DO9114
COAD
ICGC
DSGDDS
DEG_SCF_TRCP1_1
0.1667
p.E55K
DO233823
GACA
ICGC
DSGDDS
DEG_SCF_TRCP1_1
0.0833
p.D54G
DO38404
STAD
ICGC
DSGDDS
DEG_SCF_TRCP1_1
0.1111
p.D40N
DO50076
UCEC
ICGC
DSGDDS
DEG_SCF_TRCP1_1
0.3056
p.S34N
DO42280
UCEC
ICGC
DSGDDS
DEG_SCF_TRCP1_1
0.1389
p.D40E
DO41536
UCEC
ICGC
DSGDDS
DEG_SCF_TRCP1_1
0.3056
p.V36M
SIDM00370
T-Lymphoblastic Leukemia
GDSC
DSGDDS
DEG_SCF_TRCP1_1
0.1944
p.V36M
ACH-000197
Leukemia
CCLE
DSGDDS
DEG_SCF_TRCP1_1
0.1944
p.V36M
TALL-1
haematopoietic_and_lymphoid_tissue
COSMIC
DSGDDS
DEG_SCF_TRCP1_1
0.1944
p.G43R
SIDM01343
Gastric Carcinoma
GDSC
DSGDDS
DEG_SCF_TRCP1_1
0.7568
p.G43R
ACH-000764
Gastric Cancer
CCLE
DSGDDS
DEG_SCF_TRCP1_1
0.7568
p.G40V
ACH-000512
Myeloma
CCLE
DSGDDS
DEG_SCF_TRCP1_1
0.3056
p.V32M
TALL-1
haematopoietic_and_lymphoid_tissue
COSMIC
DSGDDS
DEG_SCF_TRCP1_1
0.0833
p.V35M
TALL-1
haematopoietic_and_lymphoid_tissue
COSMIC
DSGDDS
DEG_SCF_TRCP1_1
0.1667
Drug responses associated with PHRF1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of DSGDDS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9P1Y6
PHD and RING finger domain-containing protein 1
DEG_SCF_TRCP1_1
41:46
DSGDDS
BTRC
0.723
More...