DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
DSGDEDS
Uniprot ID:
Q6P3X8
Source protein:
PiggyBac transposable element-derived protein 2
Source gene:
PGBD2
Class:
DEG_SCF_TRCP1_1
Location:
58:64
E3 ligase:
BTRC
DEGRON score:
0.9011
ASA_SCORE:
78.5429
COIL:
0.8561
CONS_SCORE:
0.4429
DSS_SCORE:
0.7586
HELIX:
0.1033
FCONS_SCORE:
0.9922
RIG_SCORE:
0.6322
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S59L
TCGA-33-4533
LUSC
TCGA
DSGDEDS
DEG_SCF_TRCP1_1
0.7667
p.D48N
TCGA-AX-A3G8
UCEC
TCGA
DSGDEDS
DEG_SCF_TRCP1_1
0.0556
p.D48N
TCGA-B5-A0JY
UCEC
TCGA
DSGDEDS
DEG_SCF_TRCP1_1
0.0556
p.L65V
DO14902
HNSC
ICGC
DSGDEDS
DEG_SCF_TRCP1_1
0.3056
p.L65V
KYSE-70
oesophagus
COSMIC
DSGDEDS
DEG_SCF_TRCP1_1
0.3056
p.L65V
HuO9
bone
COSMIC
DSGDEDS
DEG_SCF_TRCP1_1
0.3056
p.L65V
KU-19-19
urinary_tract
COSMIC
DSGDEDS
DEG_SCF_TRCP1_1
0.3056
p.L65V
SNU-81
large_intestine
COSMIC
DSGDEDS
DEG_SCF_TRCP1_1
0.3056
p.R63Q
DO225415
LAML
ICGC
DSGDEDS
DEG_SCF_TRCP1_1
0.7329
p.R63Q
DO225430
LAML
ICGC
DSGDEDS
DEG_SCF_TRCP1_1
0.7329
p.R63Q
DO51017
LAML
ICGC
DSGDEDS
DEG_SCF_TRCP1_1
0.7329
p.D70Y
DO228948
LICA
ICGC
DSGDEDS
DEG_SCF_TRCP1_1
0.1667
p.S61I
DO229051
LICA
ICGC
DSGDEDS
DEG_SCF_TRCP1_1
0.7341
p.S56L
DO27572
LUSC
ICGC
DSGDEDS
DEG_SCF_TRCP1_1
0.2778
p.A51V
SIDM00889
Cervical Carcinoma
GDSC
DSGDEDS
DEG_SCF_TRCP1_1
0.1389
p.A51V
ACH-001333
Cervical Cancer
CCLE
DSGDEDS
DEG_SCF_TRCP1_1
0.1389
p.A51V
C-33-A
cervix
COSMIC
DSGDEDS
DEG_SCF_TRCP1_1
0.1389
Drug responses associated with PGBD2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of DSGDEDS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q6P3X8
PiggyBac transposable element-derived protein 2
DEG_SCF_TRCP1_1
58:64
DSGDEDS
BTRC
0.9011
More...