DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
DSGDQAS
Uniprot ID:
Q9NZ53
Source protein:
Podocalyxin-like protein 2
Source gene:
PODXL2
Class:
DEG_SCF_TRCP1_1
Location:
224:230
E3 ligase:
BTRC
DEGRON score:
0.9994
ASA_SCORE:
80.5571
COIL:
0.8746
CONS_SCORE:
0.6075
DSS_SCORE:
0.7362
HELIX:
0.0913
FCONS_SCORE:
1.2637
RIG_SCORE:
0.5712
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.M239I
TCGA-66-2758
LUSC
TCGA
DSGDQAS
DEG_SCF_TRCP1_1
0.0833
p.M239I
DO26731
LUSC
ICGC
DSGDQAS
DEG_SCF_TRCP1_1
0.0833
p.G232D
TCGA-AP-A051
UCEC
TCGA
DSGDQAS
DEG_SCF_TRCP1_1
0.2778
p.G232D
DO42673
UCEC
ICGC
DSGDQAS
DEG_SCF_TRCP1_1
0.2778
p.H222Q
TCGA-RC-A6M6
LIHC
TCGA
DSGDQAS
DEG_SCF_TRCP1_1
0.2778
p.H222Q
DO223917
LIHC
ICGC
DSGDQAS
DEG_SCF_TRCP1_1
0.2778
p.M239V
DO233193
GACA
ICGC
DSGDQAS
DEG_SCF_TRCP1_1
0.0833
p.G226R
SIDM01156
Small Cell Lung Carcinoma
GDSC
DSGDQAS
DEG_SCF_TRCP1_1
0.7568
p.P215S
SIDM01133
Other Solid Cancers
GDSC
DSGDQAS
DEG_SCF_TRCP1_1
0.0833
p.P215S
ACH-002177
Lung Cancer
CCLE
DSGDQAS
DEG_SCF_TRCP1_1
0.0833
p.P215S
NCI-H835
lung
COSMIC
DSGDQAS
DEG_SCF_TRCP1_1
0.0833
Drug responses associated with PODXL2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of DSGDQAS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9NZ53
Podocalyxin-like protein 2
DEG_SCF_TRCP1_1
224:230
DSGDQAS
BTRC
0.9994
More...