DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
DSGDRT
Uniprot ID:
Q8N3P4
Source protein:
Vacuolar protein sorting-associated protein 8 homolog
Source gene:
VPS8
Class:
DEG_SCF_TRCP1_1
Location:
109:114
E3 ligase:
BTRC
DEGRON score:
0.7926
ASA_SCORE:
85.0833
COIL:
0.796
CONS_SCORE:
0.2284
DSS_SCORE:
0.5419
HELIX:
0.1565
FCONS_SCORE:
1.0095
RIG_SCORE:
0.6313
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.K120N
TCGA-AA-3977
COAD
TCGA
DSGDRT
DEG_SCF_TRCP1_1
0.2778
p.K120N
DO8730
COAD
ICGC
DSGDRT
DEG_SCF_TRCP1_1
0.2778
p.K120N
DO228627
GACA
ICGC
DSGDRT
DEG_SCF_TRCP1_1
0.2778
p.K120N
DO36881
READ
ICGC
DSGDRT
DEG_SCF_TRCP1_1
0.2778
p.D101A
TCGA-BS-A0UV
UCEC
TCGA
DSGDRT
DEG_SCF_TRCP1_1
0.1111
p.D101A
DO42793
UCEC
ICGC
DSGDRT
DEG_SCF_TRCP1_1
0.1111
p.S104Y
TCGA-GN-A265
SKCM
TCGA
DSGDRT
DEG_SCF_TRCP1_1
0.1944
p.S104Y
DO37491
SKCM
ICGC
DSGDRT
DEG_SCF_TRCP1_1
0.1944
p.G111D
DO234230
ESAD
ICGC
DSGDRT
DEG_SCF_TRCP1_1
0.7198
p.S107I
DO228924
LICA
ICGC
DSGDRT
DEG_SCF_TRCP1_1
0.2778
p.D112N
SIDM01770
Gastric Carcinoma
GDSC
DSGDRT
DEG_SCF_TRCP1_1
0.5821
p.D112N
ACH-000908
Gastric Cancer
CCLE
DSGDRT
DEG_SCF_TRCP1_1
0.5821
p.K121N
SIDM01611
Endometrial Carcinoma
GDSC
DSGDRT
DEG_SCF_TRCP1_1
0.25
p.K121N
ACH-000996
Endometrial/Uterine Cancer
CCLE
DSGDRT
DEG_SCF_TRCP1_1
0.25
Drug responses associated with VPS8 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of DSGDRT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8N3P4
Vacuolar protein sorting-associated protein 8 homolog
DEG_SCF_TRCP1_1
109:114
DSGDRT
BTRC
0.7926
More...