DegronMD: protein-targeted degradation, mutation and drug response to degrons
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CGC
Degron:
DSGEDSS
Uniprot ID:
Q8NDX1
Source protein:
PH and SEC7 domain-containing protein 4
Source gene:
PSD4
Class:
DEG_SCF_TRCP1_1
Location:
210:216
E3 ligase:
BTRC
DEGRON score:
0.9908
ASA_SCORE:
81.0286
COIL:
0.9236
CONS_SCORE:
0.3454
DSS_SCORE:
0.9389
HELIX:
0.0484
FCONS_SCORE:
1.1197
RIG_SCORE:
0.5195
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.G212V
TCGA-18-3412
LUSC
TCGA
DSGEDSS
DEG_SCF_TRCP1_1
0.7532
p.G212V
TCGA-3M-AB46
STAD
TCGA
DSGEDSS
DEG_SCF_TRCP1_1
0.7532
p.G212V
DO26552
LUSC
ICGC
DSGEDSS
DEG_SCF_TRCP1_1
0.7532
p.G212V
DO222326
STAD
ICGC
DSGEDSS
DEG_SCF_TRCP1_1
0.7532
p.E213D
TCGA-55-8094
LUAD
TCGA
DSGEDSS
DEG_SCF_TRCP1_1
0.5647
p.E213D
DO24150
LUAD
ICGC
DSGEDSS
DEG_SCF_TRCP1_1
0.5647
p.E213Q
TCGA-57-1992
OV
TCGA
DSGEDSS
DEG_SCF_TRCP1_1
0.5633
p.E213Q
DO32247
OV
ICGC
DSGEDSS
DEG_SCF_TRCP1_1
0.5633
p.P206S
TCGA-DD-AAC9
LIHC
TCGA
DSGEDSS
DEG_SCF_TRCP1_1
0.2222
p.P206S
DO52194
LIHC
ICGC
DSGEDSS
DEG_SCF_TRCP1_1
0.2222
p.E209K
TCGA-EB-A3XD
SKCM
TCGA
DSGEDSS
DEG_SCF_TRCP1_1
0.3056
p.E209K
DO37871
SKCM
ICGC
DSGEDSS
DEG_SCF_TRCP1_1
0.3056
p.E213K
TCGA-EB-A431
SKCM
TCGA
DSGEDSS
DEG_SCF_TRCP1_1
0.591
p.E213K
TCGA-EE-A2MR
SKCM
TCGA
DSGEDSS
DEG_SCF_TRCP1_1
0.591
p.E213K
DO37671
SKCM
ICGC
DSGEDSS
DEG_SCF_TRCP1_1
0.591
p.E213K
DO37819
SKCM
ICGC
DSGEDSS
DEG_SCF_TRCP1_1
0.591
p.E213K
ACH-001554
Eye Cancer
CCLE
DSGEDSS
DEG_SCF_TRCP1_1
0.591
p.P206H
TCGA-G4-6588
COAD
TCGA
DSGEDSS
DEG_SCF_TRCP1_1
0.2222
p.P206H
DO10140
COAD
ICGC
DSGEDSS
DEG_SCF_TRCP1_1
0.2222
p.E217Q
DO234197
ESAD
ICGC
DSGEDSS
DEG_SCF_TRCP1_1
0.3056
p.S204I
DO229018
LICA
ICGC
DSGEDSS
DEG_SCF_TRCP1_1
0.1667
p.W225L
DO229035
LICA
ICGC
DSGEDSS
DEG_SCF_TRCP1_1
0.0833
p.E217K
DO222420
MELA
ICGC
DSGEDSS
DEG_SCF_TRCP1_1
0.3056
p.G222A
DO233297
NACA
ICGC
DSGEDSS
DEG_SCF_TRCP1_1
0.1667
p.S211A
SIDM01081
Oral Cavity Carcinoma
GDSC
DSGEDSS
DEG_SCF_TRCP1_1
0.7588
p.E219Q
ACH-000836
Head and Neck Cancer
CCLE
DSGEDSS
DEG_SCF_TRCP1_1
0.25
p.E221D
ACH-000941
Endometrial/Uterine Cancer
CCLE
DSGEDSS
DEG_SCF_TRCP1_1
0.1944
p.G220E
ACH-001232
Brain Cancer
CCLE
DSGEDSS
DEG_SCF_TRCP1_1
0.2222
Drug responses associated with PSD4 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of DSGEDSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8NDX1
PH and SEC7 domain-containing protein 4
DEG_SCF_TRCP1_1
210:216
DSGEDSS
BTRC
0.9908
More...