DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
DSGENTS
Uniprot ID:
O15027
Source protein:
Protein transport protein Sec16A
Source gene:
SEC16A
Class:
DEG_SCF_TRCP1_1
Location:
878:884
E3 ligase:
BTRC
DEGRON score:
0.9439
ASA_SCORE:
77.2143
COIL:
0.8924
CONS_SCORE:
0.228
DSS_SCORE:
0.4472
HELIX:
0.0731
FCONS_SCORE:
0.9168
RIG_SCORE:
0.6344
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.D878N
TCGA-BH-A1FM
BRCA
TCGA
DSGENTS
DEG_SCF_TRCP1_1
0.6932
p.D878N
DO1364
BRCA
ICGC
DSGENTS
DEG_SCF_TRCP1_1
0.6932
p.G880V
TCGA-EE-A2GH
SKCM
TCGA
DSGENTS
DEG_SCF_TRCP1_1
0.7532
p.G880V
DO37643
SKCM
ICGC
DSGENTS
DEG_SCF_TRCP1_1
0.7532
p.G887V
TCGA-EE-A2MD
SKCM
TCGA
DSGENTS
DEG_SCF_TRCP1_1
0.25
p.G887V
DO37851
SKCM
ICGC
DSGENTS
DEG_SCF_TRCP1_1
0.25
p.G876C
TCGA-GN-A26D
SKCM
TCGA
DSGENTS
DEG_SCF_TRCP1_1
0.2778
p.G876C
DO37480
SKCM
ICGC
DSGENTS
DEG_SCF_TRCP1_1
0.2778
p.P868L
DO222908
MELA
ICGC
DSGENTS
DEG_SCF_TRCP1_1
0.0556
p.G876D
SIDM01953
Colorectal Carcinoma
GDSC
DSGENTS
DEG_SCF_TRCP1_1
0.2778
p.G887E
SIDM00700
Non-Small Cell Lung Carcinoma
GDSC
DSGENTS
DEG_SCF_TRCP1_1
0.25
p.E877K
ACH-000246
Kidney Cancer
CCLE
DSGENTS
DEG_SCF_TRCP1_1
0.3056
Drug responses associated with SEC16A mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of DSGENTS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O15027
Protein transport protein Sec16A
DEG_SCF_TRCP1_1
878:884
DSGENTS
BTRC
0.9439
More...