DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
DSGFAKT
Uniprot ID:
Q7Z333
Source protein:
Probable helicase senataxin
Source gene:
SETX
Class:
DEG_SCF_TRCP1_1
Location:
2496:2502
E3 ligase:
BTRC
DEGRON score:
0.9423
ASA_SCORE:
86.5857
COIL:
0.8467
CONS_SCORE:
0.2574
DSS_SCORE:
0.4587
HELIX:
0.1337
FCONS_SCORE:
1.0574
RIG_SCORE:
0.6834
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.A2500S
TCGA-17-Z062
LUAD
TCGA
DSGFAKT
DEG_SCF_TRCP1_1
0.6477
p.L2495P
TCGA-60-2723
LUSC
TCGA
DSGFAKT
DEG_SCF_TRCP1_1
0.3056
p.T2490N
DO44216
BRCA
ICGC
DSGFAKT
DEG_SCF_TRCP1_1
0.1667
p.L2509M
DO229041
LICA
ICGC
DSGFAKT
DEG_SCF_TRCP1_1
0.1389
p.M2512I
DO28923
OV
ICGC
DSGFAKT
DEG_SCF_TRCP1_1
0.0556
p.D2505H
DO223272
SARC
ICGC
DSGFAKT
DEG_SCF_TRCP1_1
0.25
p.K2501N
SIDM00193
Colorectal Carcinoma
GDSC
DSGFAKT
DEG_SCF_TRCP1_1
0.5806
p.K2501N
ACH-000991
Colon/Colorectal Cancer
CCLE
DSGFAKT
DEG_SCF_TRCP1_1
0.5806
p.K2501N
SNU-81
large_intestine
COSMIC
DSGFAKT
DEG_SCF_TRCP1_1
0.5806
p.S2497N
SIDM00842
Colorectal Carcinoma
GDSC
DSGFAKT
DEG_SCF_TRCP1_1
0.7069
p.S2497N
SIDM01986
Non-Small Cell Lung Carcinoma
GDSC
DSGFAKT
DEG_SCF_TRCP1_1
0.7069
Drug responses associated with SETX mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of DSGFAKT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q7Z333
Probable helicase senataxin
DEG_SCF_TRCP1_1
2496:2502
DSGFAKT
BTRC
0.9423
More...