DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
DSGFGGS
Uniprot ID:
Q96Q04
Source protein:
Serine/threonine-protein kinase LMTK3
Source gene:
LMTK3
Class:
DEG_SCF_TRCP1_1
Location:
1406:1412
E3 ligase:
BTRC
DEGRON score:
0.9837
ASA_SCORE:
57.4714
COIL:
0.7844
CONS_SCORE:
0.343
DSS_SCORE:
0.6233
HELIX:
0.067
FCONS_SCORE:
1.0483
RIG_SCORE:
0.5854
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.E1414Q
DO219049
BLCA
ICGC
DSGFGGS
DEG_SCF_TRCP1_1
0.2778
p.T1397I
DO229010
COCA
ICGC
DSGFGGS
DEG_SCF_TRCP1_1
0.0833
p.L1421F
DO222349
STAD
ICGC
DSGFGGS
DEG_SCF_TRCP1_1
0.0833
p.W1415C
DO229227
THCA
ICGC
DSGFGGS
DEG_SCF_TRCP1_1
0.25
p.E1399K
SIDM02013
Colorectal Carcinoma
GDSC
DSGFGGS
DEG_SCF_TRCP1_1
0.1389
Drug responses associated with LMTK3 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of DSGFGGS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q96Q04
Serine/threonine-protein kinase LMTK3
DEG_SCF_TRCP1_1
1406:1412
DSGFGGS
BTRC
0.9837
More...