DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
DSGFSS
Uniprot ID:
Q9NYL2
Source protein:
Mitogen-activated protein kinase kinase kinase 20
Source gene:
MAP3K20
Class:
DEG_SCF_TRCP1_1
Location:
656:661
E3 ligase:
BTRC
DEGRON score:
0.9991
ASA_SCORE:
66.8667
COIL:
0.9338
CONS_SCORE:
0.4476
DSS_SCORE:
0.5667
HELIX:
0.0345
FCONS_SCORE:
1.2223
RIG_SCORE:
0.5794
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.H651R
SIDM00961
Ewing's Sarcoma
GDSC
DSGFSS
DEG_SCF_TRCP1_1
0.1944
p.H651R
SIDM00397
Acute Myeloid Leukemia
GDSC
DSGFSS
DEG_SCF_TRCP1_1
0.1944
p.H651R
SIDM00560
Gastric Carcinoma
GDSC
DSGFSS
DEG_SCF_TRCP1_1
0.1944
p.H651R
SIDM00603
Head and Neck Carcinoma
GDSC
DSGFSS
DEG_SCF_TRCP1_1
0.1944
p.H651R
SIDM01454
Kidney Carcinoma
GDSC
DSGFSS
DEG_SCF_TRCP1_1
0.1944
p.H651R
MKN7
stomach
COSMIC
DSGFSS
DEG_SCF_TRCP1_1
0.1944
p.H651R
KOSC-2
upper_aerodigestive_tract
COSMIC
DSGFSS
DEG_SCF_TRCP1_1
0.1944
p.H651R
Set2
haematopoietic_and_lymphoid_tissue
COSMIC
DSGFSS
DEG_SCF_TRCP1_1
0.1944
p.H651R
CADO-ES1
bone
COSMIC
DSGFSS
DEG_SCF_TRCP1_1
0.1944
p.S649F
SIDM01175
Other Sarcomas
GDSC
DSGFSS
DEG_SCF_TRCP1_1
0.5833
p.S649F
SW684
soft_tissue
COSMIC
DSGFSS
DEG_SCF_TRCP1_1
0.5833
Drug responses associated with MAP3K20 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of DSGFSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P07333
Macrophage colony-stimulating factor 1 receptor
DEG_SCF_TRCP1_1
712:717
DSGFSS
BTRC
0.9992
More...
Q9NYL2
Mitogen-activated protein kinase kinase kinase 20
DEG_SCF_TRCP1_1
656:661
DSGFSS
BTRC
0.9991
More...