DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
DSGGRGS
Uniprot ID:
Q4ZIN3
Source protein:
Membralin
Source gene:
TMEM259
Class:
DEG_SCF_TRCP1_1
Location:
130:136
E3 ligase:
BTRC
DEGRON score:
0.9281
ASA_SCORE:
64.4286
COIL:
0.8017
CONS_SCORE:
0.2911
DSS_SCORE:
0.3631
HELIX:
0.0424
FCONS_SCORE:
0.8919
RIG_SCORE:
0.6194
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.V142L
TCGA-60-2726
LUSC
TCGA
DSGGRGS
DEG_SCF_TRCP1_1
0.1667
p.V142L
DO27484
LUSC
ICGC
DSGGRGS
DEG_SCF_TRCP1_1
0.1667
p.V142L
SIDM00486
Squamous Cell Lung Carcinoma
GDSC
DSGGRGS
DEG_SCF_TRCP1_1
0.1667
p.V142L
ACH-000563
Lung Cancer
CCLE
DSGGRGS
DEG_SCF_TRCP1_1
0.1667
p.V142L
EBC-1
lung
COSMIC
DSGGRGS
DEG_SCF_TRCP1_1
0.1667
p.G132V
TCGA-85-8287
LUSC
TCGA
DSGGRGS
DEG_SCF_TRCP1_1
0.7532
p.G132V
DO27492
LUSC
ICGC
DSGGRGS
DEG_SCF_TRCP1_1
0.7532
p.G133S
TCGA-BR-6566
STAD
TCGA
DSGGRGS
DEG_SCF_TRCP1_1
0.5882
p.G133S
DO38217
STAD
ICGC
DSGGRGS
DEG_SCF_TRCP1_1
0.5882
p.R121C
TCGA-CM-6167
COAD
TCGA
DSGGRGS
DEG_SCF_TRCP1_1
0.0833
p.R121C
DO10212
COAD
ICGC
DSGGRGS
DEG_SCF_TRCP1_1
0.0833
p.R121C
DO42256
UCEC
ICGC
DSGGRGS
DEG_SCF_TRCP1_1
0.0833
p.P138S
TCGA-DX-A8BP
SARC
TCGA
DSGGRGS
DEG_SCF_TRCP1_1
0.2778
p.P138S
DO220056
SARC
ICGC
DSGGRGS
DEG_SCF_TRCP1_1
0.2778
p.G135R
TCGA-EO-A22U
UCEC
TCGA
DSGGRGS
DEG_SCF_TRCP1_1
0.6457
p.G135R
DO43755
UCEC
ICGC
DSGGRGS
DEG_SCF_TRCP1_1
0.6457
p.G135R
SIDM00250
Esophageal Squamous Cell Carcinoma
GDSC
DSGGRGS
DEG_SCF_TRCP1_1
0.6457
p.G135R
ACH-000917
Esophageal Cancer
CCLE
DSGGRGS
DEG_SCF_TRCP1_1
0.6457
p.G135R
TE-4
oesophagus
COSMIC
DSGGRGS
DEG_SCF_TRCP1_1
0.6457
p.A122V
TCGA-EO-A22U
UCEC
TCGA
DSGGRGS
DEG_SCF_TRCP1_1
0.1111
p.A122V
DO43755
UCEC
ICGC
DSGGRGS
DEG_SCF_TRCP1_1
0.1111
p.S146N
TCGA-FA-A7Q1
DLBC
TCGA
DSGGRGS
DEG_SCF_TRCP1_1
0.0556
p.S146N
DO219890
DLBC
ICGC
DSGGRGS
DEG_SCF_TRCP1_1
0.0556
p.P138T
TCGA-FS-A1ZP
SKCM
TCGA
DSGGRGS
DEG_SCF_TRCP1_1
0.2778
p.P138T
DO37703
SKCM
ICGC
DSGGRGS
DEG_SCF_TRCP1_1
0.2778
p.A141V
TCGA-GF-A6C9
SKCM
TCGA
DSGGRGS
DEG_SCF_TRCP1_1
0.1944
p.A141V
DO51254
SKCM
ICGC
DSGGRGS
DEG_SCF_TRCP1_1
0.1944
p.V124I
DO227987
COCA
ICGC
DSGGRGS
DEG_SCF_TRCP1_1
0.1667
p.V142M
DO222765
COCA
ICGC
DSGGRGS
DEG_SCF_TRCP1_1
0.1667
p.G139D
DO50970
LICA
ICGC
DSGGRGS
DEG_SCF_TRCP1_1
0.25
p.A122T
SIDM01161
Other Sarcomas
GDSC
DSGGRGS
DEG_SCF_TRCP1_1
0.1111
p.S131I
SIDM01097
Other Solid Cancers
GDSC
DSGGRGS
DEG_SCF_TRCP1_1
0.7341
p.S131I
ACH-001193
Bone Cancer
CCLE
DSGGRGS
DEG_SCF_TRCP1_1
0.7341
p.S131I
SK-PN-DW
bone
COSMIC
DSGGRGS
DEG_SCF_TRCP1_1
0.7341
p.S146R
ACH-000923
Lymphoma
CCLE
DSGGRGS
DEG_SCF_TRCP1_1
0.0556
Drug responses associated with TMEM259 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of DSGGRGS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q4ZIN3
Membralin
DEG_SCF_TRCP1_1
130:136
DSGGRGS
BTRC
0.9281
More...