DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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CGC
Degron:
DSGHAPS
Uniprot ID:
Q8TDI7
Source protein:
Transmembrane channel-like protein 2
Source gene:
TMC2
Class:
DEG_SCF_TRCP1_1
Location:
882:888
E3 ligase:
BTRC
DEGRON score:
0.9597
ASA_SCORE:
73.4857
COIL:
0.9214
CONS_SCORE:
0.3413
DSS_SCORE:
0.8272
HELIX:
0.0559
FCONS_SCORE:
0.9217
RIG_SCORE:
0.4957
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.H885R
TCGA-CV-5430
HNSC
TCGA
DSGHAPS
DEG_SCF_TRCP1_1
0.7133
p.H885R
DO14270
HNSC
ICGC
DSGHAPS
DEG_SCF_TRCP1_1
0.7133
p.P892L
TCGA-DU-6392
LGG
TCGA
DSGHAPS
DEG_SCF_TRCP1_1
0.2222
p.P892L
DO22237
LGG
ICGC
DSGHAPS
DEG_SCF_TRCP1_1
0.2222
p.Q889E
TCGA-FU-A3TX
CESC
TCGA
DSGHAPS
DEG_SCF_TRCP1_1
0.3056
p.Q889E
DO44281
CESC
ICGC
DSGHAPS
DEG_SCF_TRCP1_1
0.3056
p.G880R
DO229054
LICA
ICGC
DSGHAPS
DEG_SCF_TRCP1_1
0.2778
p.R894M
DO46394
OV
ICGC
DSGHAPS
DEG_SCF_TRCP1_1
0.1667
p.D882Y
SIDM00783
Colorectal Carcinoma
GDSC
DSGHAPS
DEG_SCF_TRCP1_1
0.7325
p.D882Y
ACH-000971
Colon/Colorectal Cancer
CCLE
DSGHAPS
DEG_SCF_TRCP1_1
0.7325
p.D882Y
HCT-116
large_intestine
COSMIC
DSGHAPS
DEG_SCF_TRCP1_1
0.7325
p.A886T
ACH-000939
Sarcoma
CCLE
DSGHAPS
DEG_SCF_TRCP1_1
0.6028
p.A886T
SK-UT-1
soft_tissue
COSMIC
DSGHAPS
DEG_SCF_TRCP1_1
0.6028
p.S895A
ACH-002254
Lymphoma
CCLE
DSGHAPS
DEG_SCF_TRCP1_1
0.1389
p.S895A
KARPAS-1106P
haematopoietic_and_lymphoid_tissue
COSMIC
DSGHAPS
DEG_SCF_TRCP1_1
0.1389
Drug responses associated with TMC2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of DSGHAPS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8TDI7
Transmembrane channel-like protein 2
DEG_SCF_TRCP1_1
882:888
DSGHAPS
BTRC
0.9597
More...