DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
DSGHCVPEP
Uniprot ID:
P48634
Source protein:
Protein PRRC2A
Source gene:
PRRC2A
Class:
DEG_COP1_1
Location:
1817:1825
E3 ligase:
COP1
DEGRON score:
0.9888
ASA_SCORE:
89.2667
COIL:
0.9532
CONS_SCORE:
0.4174
DSS_SCORE:
0.6332
HELIX:
0.0272
FCONS_SCORE:
0.9289
RIG_SCORE:
0.631
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.K1814T
TCGA-17-Z015
LUAD
TCGA
DSGHCVPEP
DEG_COP1_1
0.6944
p.S1808F
TCGA-18-3409
LUSC
TCGA
DSGHCVPEP
DEG_COP1_1
0.0833
p.S1808F
DO26444
LUSC
ICGC
DSGHCVPEP
DEG_COP1_1
0.0833
p.S1808F
SIDM00864
Cervical Carcinoma
GDSC
DSGHCVPEP
DEG_COP1_1
0.0833
p.P1823Q
TCGA-BR-4201
STAD
TCGA
DSGHCVPEP
DEG_COP1_1
0.7035
p.P1823Q
DO38707
STAD
ICGC
DSGHCVPEP
DEG_COP1_1
0.7035
p.P1823S
TCGA-QC-A7B5
SARC
TCGA
DSGHCVPEP
DEG_COP1_1
0.6752
p.P1823S
DO220239
SARC
ICGC
DSGHCVPEP
DEG_COP1_1
0.6752
p.P1823L
TCGA-QC-A7B5
SARC
TCGA
DSGHCVPEP
DEG_COP1_1
0.7582
p.P1823L
DO220239
SARC
ICGC
DSGHCVPEP
DEG_COP1_1
0.7582
p.P1823L
SIDM00370
T-Lymphoblastic Leukemia
GDSC
DSGHCVPEP
DEG_COP1_1
0.7582
p.P1823L
SIDM00616
Hepatocellular Carcinoma
GDSC
DSGHCVPEP
DEG_COP1_1
0.7582
p.P1823L
SIDM00166
Other Solid Cancers
GDSC
DSGHCVPEP
DEG_COP1_1
0.7582
p.L1832M
SIDM00946
T-Lymphoblastic Leukemia
GDSC
DSGHCVPEP
DEG_COP1_1
0.1389
p.L1832M
ACH-000981
Leukemia
CCLE
DSGHCVPEP
DEG_COP1_1
0.1389
p.L1832M
DND-41
haematopoietic_and_lymphoid_tissue
COSMIC
DSGHCVPEP
DEG_COP1_1
0.1389
p.R1831H
SIDM00781
Colorectal Carcinoma
GDSC
DSGHCVPEP
DEG_COP1_1
0.1667
p.R1831H
ACH-001199
Colon/Colorectal Cancer
CCLE
DSGHCVPEP
DEG_COP1_1
0.1667
p.R1831H
SNU-C2B
large_intestine
COSMIC
DSGHCVPEP
DEG_COP1_1
0.1667
Drug responses associated with PRRC2A mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of DSGHCVPEP
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P48634
Protein PRRC2A
DEG_COP1_1
1817:1825
DSGHCVPEP
COP1
0.9888
More...