DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
DSGHEES
Uniprot ID:
Q8TAB3
Source protein:
Protocadherin-19
Source gene:
PCDH19
Class:
DEG_SCF_TRCP1_1
Location:
906:912
E3 ligase:
BTRC
DEGRON score:
0.9677
ASA_SCORE:
79.7
COIL:
0.8423
CONS_SCORE:
0.4685
DSS_SCORE:
0.6695
HELIX:
0.1073
FCONS_SCORE:
1.0141
RIG_SCORE:
0.5947
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.L904M
TCGA-AO-A128
BRCA
TCGA
DSGHEES
DEG_SCF_TRCP1_1
0.2778
p.L904M
DO5326
BRCA
ICGC
DSGHEES
DEG_SCF_TRCP1_1
0.2778
p.S903I
TCGA-AX-A1CE
UCEC
TCGA
DSGHEES
DEG_SCF_TRCP1_1
0.25
p.S903I
DO42280
UCEC
ICGC
DSGHEES
DEG_SCF_TRCP1_1
0.25
p.S907C
TCGA-CK-4947
COAD
TCGA
DSGHEES
DEG_SCF_TRCP1_1
0.8652
p.S907C
DO10076
COAD
ICGC
DSGHEES
DEG_SCF_TRCP1_1
0.8652
p.F896L
TCGA-DA-A1HY
SKCM
TCGA
DSGHEES
DEG_SCF_TRCP1_1
0.0556
p.F896L
TCGA-Q1-A5R2
CESC
TCGA
DSGHEES
DEG_SCF_TRCP1_1
0.0556
p.F896L
DO49003
CESC
ICGC
DSGHEES
DEG_SCF_TRCP1_1
0.0556
p.F896L
DO37409
SKCM
ICGC
DSGHEES
DEG_SCF_TRCP1_1
0.0556
p.S903N
TCGA-EE-A29M
SKCM
TCGA
DSGHEES
DEG_SCF_TRCP1_1
0.25
p.S903N
DO37404
SKCM
ICGC
DSGHEES
DEG_SCF_TRCP1_1
0.25
p.S903R
TCGA-EO-A22X
UCEC
TCGA
DSGHEES
DEG_SCF_TRCP1_1
0.25
p.S903R
DO43907
UCEC
ICGC
DSGHEES
DEG_SCF_TRCP1_1
0.25
p.E910K
TCGA-IR-A3LA
CESC
TCGA
DSGHEES
DEG_SCF_TRCP1_1
0.591
p.E910K
DO44377
CESC
ICGC
DSGHEES
DEG_SCF_TRCP1_1
0.591
p.G906R
COLO-792
skin
COSMIC
DSGHEES
DEG_SCF_TRCP1_1
0.7568
p.H909Y
SW684
soft_tissue
COSMIC
DSGHEES
DEG_SCF_TRCP1_1
0.6118
p.H909Y
MCC26
skin
COSMIC
DSGHEES
DEG_SCF_TRCP1_1
0.6118
p.H908Y
SW684
soft_tissue
COSMIC
DSGHEES
DEG_SCF_TRCP1_1
0.7229
p.H908Y
MCC26
skin
COSMIC
DSGHEES
DEG_SCF_TRCP1_1
0.7229
p.G907R
COLO-792
skin
COSMIC
DSGHEES
DEG_SCF_TRCP1_1
0.7568
Drug responses associated with PCDH19 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of DSGHEES
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8TAB3
Protocadherin-19
DEG_SCF_TRCP1_1
906:912
DSGHEES
BTRC
0.9677
More...