DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
DSGIMSS
Uniprot ID:
Q8NET4
Source protein:
Retrotransposon Gag-like protein 9
Source gene:
RTL9
Class:
DEG_SCF_TRCP1_1
Location:
303:309
E3 ligase:
BTRC
DEGRON score:
0.9652
ASA_SCORE:
79.2
COIL:
0.8103
CONS_SCORE:
0.4037
DSS_SCORE:
0.5296
HELIX:
0.1149
FCONS_SCORE:
0.8287
RIG_SCORE:
0.7186
Degron related mutations and impact score
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Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S304F
SIDM01605
Non-Small Cell Lung Carcinoma
GDSC
DSGIMSS
DEG_SCF_TRCP1_1
0.7982
p.G293R
SIDM00522
Small Cell Lung Carcinoma
GDSC
DSGIMSS
DEG_SCF_TRCP1_1
0.0556
p.G293R
SIDM00140
Melanoma
GDSC
DSGIMSS
DEG_SCF_TRCP1_1
0.0556
p.G293R
DMS-273
lung
COSMIC
DSGIMSS
DEG_SCF_TRCP1_1
0.0556
p.G293R
COLO-792
skin
COSMIC
DSGIMSS
DEG_SCF_TRCP1_1
0.0556
p.G293E
SIDM00221
Melanoma
GDSC
DSGIMSS
DEG_SCF_TRCP1_1
0.0556
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Drug responses associated with RTL9 mutations
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Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
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All proteins holding degron of DSGIMSS
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Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8NET4
Retrotransposon Gag-like protein 9
DEG_SCF_TRCP1_1
303:309
DSGIMSS
BTRC
0.9652
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