DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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Degron:
DSGKPST
Uniprot ID:
Q6KC79
Source protein:
Nipped-B-like protein
Source gene:
NIPBL
Class:
DEG_SCF_TRCP1_1
Location:
767:773
E3 ligase:
BTRC
DEGRON score:
0.9898
ASA_SCORE:
89.6
COIL:
0.9401
CONS_SCORE:
0.1914
DSS_SCORE:
0.8561
HELIX:
0.043
FCONS_SCORE:
0.989
RIG_SCORE:
0.4712
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.D767N
TCGA-AG-A002
READ
TCGA
DSGKPST
DEG_SCF_TRCP1_1
0.6932
p.D767N
DO234173
ESAD
ICGC
DSGKPST
DEG_SCF_TRCP1_1
0.6932
p.R766M
TCGA-BH-A0HA
BRCA
TCGA
DSGKPST
DEG_SCF_TRCP1_1
0.3056
p.R766M
DO1658
BRCA
ICGC
DSGKPST
DEG_SCF_TRCP1_1
0.3056
p.R761M
DO228976
LICA
ICGC
DSGKPST
DEG_SCF_TRCP1_1
0.1667
p.K776Q
DO50822
LIRI
ICGC
DSGKPST
DEG_SCF_TRCP1_1
0.3611
p.R765K
SIDM01185
Other Solid Cancers
GDSC
DSGKPST
DEG_SCF_TRCP1_1
0.2778
p.R765K
SIDM01084
Osteosarcoma
GDSC
DSGKPST
DEG_SCF_TRCP1_1
0.2778
Drug responses associated with NIPBL mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of DSGKPST
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q6KC79
Nipped-B-like protein
DEG_SCF_TRCP1_1
767:773
DSGKPST
BTRC
0.9898
More...