DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
DSGKTFS
Uniprot ID:
Q9NXR1
Source protein:
Nuclear distribution protein nudE homolog 1
Source gene:
NDE1
Class:
DEG_SCF_TRCP1_1
Location:
3:9
E3 ligase:
BTRC
DEGRON score:
0.9618
ASA_SCORE:
84.8714
COIL:
0.946
CONS_SCORE:
0.5962
DSS_SCORE:
0.7884
HELIX:
0.0289
FCONS_SCORE:
0.8963
RIG_SCORE:
0.662
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S10C
TCGA-CF-A47V
BLCA
TCGA
DSGKTFS
DEG_SCF_TRCP1_1
0.75
p.S10C
DO44053
BLCA
ICGC
DSGKTFS
DEG_SCF_TRCP1_1
0.75
p.G5R
TCGA-D5-6531
COAD
TCGA
DSGKTFS
DEG_SCF_TRCP1_1
0.7568
p.G5R
DO7983
COAD
ICGC
DSGKTFS
DEG_SCF_TRCP1_1
0.7568
p.S10F
TCGA-EE-A20C
SKCM
TCGA
DSGKTFS
DEG_SCF_TRCP1_1
0.75
p.S10F
DO222775
MELA
ICGC
DSGKTFS
DEG_SCF_TRCP1_1
0.75
p.S10F
DO47665
SKCM
ICGC
DSGKTFS
DEG_SCF_TRCP1_1
0.75
p.K6N
TCGA-F7-A622
HNSC
TCGA
DSGKTFS
DEG_SCF_TRCP1_1
0.5806
p.K6N
DO49039
HNSC
ICGC
DSGKTFS
DEG_SCF_TRCP1_1
0.5806
p.E11K
TCGA-GC-A3YS
BLCA
TCGA
DSGKTFS
DEG_SCF_TRCP1_1
0.2778
p.E11K
DO850
BLCA
ICGC
DSGKTFS
DEG_SCF_TRCP1_1
0.2778
Drug responses associated with NDE1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of DSGKTFS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9NXR1
Nuclear distribution protein nudE homolog 1
DEG_SCF_TRCP1_1
3:9
DSGKTFS
BTRC
0.9618
More...