DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
DSGKTKT
Uniprot ID:
O94818
Source protein:
Nucleolar protein 4
Source gene:
NOL4
Class:
DEG_SCF_TRCP1_1
Location:
21:27
E3 ligase:
BTRC
DEGRON score:
0.5487
ASA_SCORE:
80.3857
COIL:
0.7039
CONS_SCORE:
0.4952
DSS_SCORE:
0.3015
HELIX:
0.1906
FCONS_SCORE:
0.9534
RIG_SCORE:
0.7293
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R30H
TCGA-3M-AB47
STAD
TCGA
DSGKTKT
DEG_SCF_TRCP1_1
0.25
p.R30H
DO222327
STAD
ICGC
DSGKTKT
DEG_SCF_TRCP1_1
0.25
p.S22L
TCGA-86-8278
LUAD
TCGA
DSGKTKT
DEG_SCF_TRCP1_1
0.7667
p.S22L
DO26308
LUAD
ICGC
DSGKTKT
DEG_SCF_TRCP1_1
0.7667
p.C15R
TCGA-BR-7851
STAD
TCGA
DSGKTKT
DEG_SCF_TRCP1_1
0.1667
p.C15R
DO38711
STAD
ICGC
DSGKTKT
DEG_SCF_TRCP1_1
0.1667
p.T29I
TCGA-E7-A677
BLCA
TCGA
DSGKTKT
DEG_SCF_TRCP1_1
0.2778
p.T29I
DO44033
BLCA
ICGC
DSGKTKT
DEG_SCF_TRCP1_1
0.2778
p.E34K
TCGA-FR-A726
SKCM
TCGA
DSGKTKT
DEG_SCF_TRCP1_1
0.1389
p.E34K
DO48665
SKCM
ICGC
DSGKTKT
DEG_SCF_TRCP1_1
0.1389
p.E34K
SIDM00651
Non-Small Cell Lung Carcinoma
GDSC
DSGKTKT
DEG_SCF_TRCP1_1
0.1389
p.E34K
ACH-000980
Lung Cancer
CCLE
DSGKTKT
DEG_SCF_TRCP1_1
0.1389
p.E34K
NCI-H1155
lung
COSMIC
DSGKTKT
DEG_SCF_TRCP1_1
0.1389
p.T27K
DO228971
LICA
ICGC
DSGKTKT
DEG_SCF_TRCP1_1
0.7306
p.T14K
DO229022
LICA
ICGC
DSGKTKT
DEG_SCF_TRCP1_1
0.1389
p.T29N
DO229045
LICA
ICGC
DSGKTKT
DEG_SCF_TRCP1_1
0.2778
p.R17S
DO50707
ORCA
ICGC
DSGKTKT
DEG_SCF_TRCP1_1
0.2222
p.I36T
SIDM01259
B-Lymphoblastic Leukemia
GDSC
DSGKTKT
DEG_SCF_TRCP1_1
0.0833
p.I36T
ACH-001669
Leukemia
CCLE
DSGKTKT
DEG_SCF_TRCP1_1
0.0833
p.I36T
ACH-002238
Leukemia
CCLE
DSGKTKT
DEG_SCF_TRCP1_1
0.0833
p.I36T
GR-ST
haematopoietic_and_lymphoid_tissue
COSMIC
DSGKTKT
DEG_SCF_TRCP1_1
0.0833
p.N20K
ACH-000158
Lymphoma
CCLE
DSGKTKT
DEG_SCF_TRCP1_1
0.3056
p.S32W
ACH-000943
Colon/Colorectal Cancer
CCLE
DSGKTKT
DEG_SCF_TRCP1_1
0.3056
p.S32W
RKO
large_intestine
COSMIC
DSGKTKT
DEG_SCF_TRCP1_1
0.3056
p.L21P
ACH-000962
Ovarian Cancer
CCLE
DSGKTKT
DEG_SCF_TRCP1_1
0.7582
p.L21P
ACH-001145
Ovarian Cancer
CCLE
DSGKTKT
DEG_SCF_TRCP1_1
0.7582
p.L21P
OC-314
ovary
COSMIC
DSGKTKT
DEG_SCF_TRCP1_1
0.7582
p.T31P
ACH-000991
Colon/Colorectal Cancer
CCLE
DSGKTKT
DEG_SCF_TRCP1_1
0.3333
p.T31P
SNU-81
large_intestine
COSMIC
DSGKTKT
DEG_SCF_TRCP1_1
0.3333
p.G20R
ACH-001568
Skin Cancer
CCLE
DSGKTKT
DEG_SCF_TRCP1_1
0.3056
p.I37N
NCI-H1770
lung
COSMIC
DSGKTKT
DEG_SCF_TRCP1_1
0.0556
p.I37S
SNU-1040
large_intestine
COSMIC
DSGKTKT
DEG_SCF_TRCP1_1
0.0556
p.R27W
CAL-51
breast
COSMIC
DSGKTKT
DEG_SCF_TRCP1_1
0.8634
Drug responses associated with NOL4 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of DSGKTKT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O94818
Nucleolar protein 4
DEG_SCF_TRCP1_1
21:27
DSGKTKT
BTRC
0.5487
More...