DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
DSGKVFT
Uniprot ID:
Q9UMD9
Source protein:
Collagen alpha-1
Source gene:
COL17A1
Class:
DEG_SCF_TRCP1_1
Location:
366:372
E3 ligase:
BTRC
DEGRON score:
0.8707
ASA_SCORE:
76.5143
COIL:
0.6746
CONS_SCORE:
0.9046
DSS_SCORE:
0.2562
HELIX:
0.0409
FCONS_SCORE:
1.2177
RIG_SCORE:
0.7526
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S374F
TCGA-19-5956
GBM
TCGA
DSGKVFT
DEG_SCF_TRCP1_1
0.2778
p.S374F
TCGA-EO-A22X
UCEC
TCGA
DSGKVFT
DEG_SCF_TRCP1_1
0.2778
p.S374F
DO13863
GBM
ICGC
DSGKVFT
DEG_SCF_TRCP1_1
0.2778
p.S374F
DO43907
UCEC
ICGC
DSGKVFT
DEG_SCF_TRCP1_1
0.2778
p.A373S
TCGA-44-7672
LUAD
TCGA
DSGKVFT
DEG_SCF_TRCP1_1
0.3056
p.A373S
DO23576
LUAD
ICGC
DSGKVFT
DEG_SCF_TRCP1_1
0.3056
p.A376T
TCGA-61-2110
OV
TCGA
DSGKVFT
DEG_SCF_TRCP1_1
0.2222
p.A376T
DO27979
OV
ICGC
DSGKVFT
DEG_SCF_TRCP1_1
0.2222
p.P375T
TCGA-95-A4VN
LUAD
TCGA
DSGKVFT
DEG_SCF_TRCP1_1
0.25
p.P375T
DO51199
LUAD
ICGC
DSGKVFT
DEG_SCF_TRCP1_1
0.25
p.K369N
TCGA-A5-A0G2
UCEC
TCGA
DSGKVFT
DEG_SCF_TRCP1_1
0.5806
p.K369N
DO41235
UCEC
ICGC
DSGKVFT
DEG_SCF_TRCP1_1
0.5806
p.M363I
TCGA-AC-A4ZE
BRCA
TCGA
DSGKVFT
DEG_SCF_TRCP1_1
0.25
p.M363I
DO223930
BRCA
ICGC
DSGKVFT
DEG_SCF_TRCP1_1
0.25
p.E357K
TCGA-GN-A266
SKCM
TCGA
DSGKVFT
DEG_SCF_TRCP1_1
0.0833
p.E357K
DO37432
SKCM
ICGC
DSGKVFT
DEG_SCF_TRCP1_1
0.0833
p.I362M
TCGA-PE-A5DE
BRCA
TCGA
DSGKVFT
DEG_SCF_TRCP1_1
0.2222
p.I362M
DO219643
BRCA
ICGC
DSGKVFT
DEG_SCF_TRCP1_1
0.2222
p.S382C
TCGA-XF-A8HF
BLCA
TCGA
DSGKVFT
DEG_SCF_TRCP1_1
0.0556
p.S382C
DO49800
BLCA
ICGC
DSGKVFT
DEG_SCF_TRCP1_1
0.0556
p.S367R
DO228976
LICA
ICGC
DSGKVFT
DEG_SCF_TRCP1_1
0.8538
p.S377R
DO229029
LICA
ICGC
DSGKVFT
DEG_SCF_TRCP1_1
0.1944
p.A380E
DO229037
LICA
ICGC
DSGKVFT
DEG_SCF_TRCP1_1
0.1111
p.A376V
SIDM00683
Prostate Carcinoma
GDSC
DSGKVFT
DEG_SCF_TRCP1_1
0.2222
p.A376V
ACH-000977
lymph_node
CCLE
DSGKVFT
DEG_SCF_TRCP1_1
0.2222
p.A376V
LNCaP-Clone-FGC
prostate
COSMIC
DSGKVFT
DEG_SCF_TRCP1_1
0.2222
p.A380T
SIDM00785
Acute Myeloid Leukemia
GDSC
DSGKVFT
DEG_SCF_TRCP1_1
0.1111
Drug responses associated with COL17A1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of DSGKVFT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9UMD9
Collagen alpha-1
DEG_SCF_TRCP1_1
366:372
DSGKVFT
BTRC
0.8707
More...