DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
DSGNDTS
Uniprot ID:
A7MD48
Source protein:
Serine/arginine repetitive matrix protein 4
Source gene:
SRRM4
Class:
DEG_SCF_TRCP1_1
Location:
286:292
E3 ligase:
BTRC
DEGRON score:
0.9941
ASA_SCORE:
92.0429
COIL:
0.9476
CONS_SCORE:
0.9615
DSS_SCORE:
0.7934
HELIX:
0.0391
FCONS_SCORE:
1.5032
RIG_SCORE:
0.5388
Degron related mutations and impact score
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Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S287L
SIDM01782
Oral Cavity Carcinoma
GDSC
DSGNDTS
DEG_SCF_TRCP1_1
0.7667
p.S287L
ACH-000723
Head and Neck Cancer
CCLE
DSGNDTS
DEG_SCF_TRCP1_1
0.7667
p.G288E
TCGA-55-A494
LUAD
TCGA
DSGNDTS
DEG_SCF_TRCP1_1
0.7199
p.G288E
DO23794
LUAD
ICGC
DSGNDTS
DEG_SCF_TRCP1_1
0.7199
p.G288E
DO222837
MELA
ICGC
DSGNDTS
DEG_SCF_TRCP1_1
0.7199
p.D286N
DO233935
GACA
ICGC
DSGNDTS
DEG_SCF_TRCP1_1
0.6932
p.S292A
TCGA-60-2708
LUSC
TCGA
DSGNDTS
DEG_SCF_TRCP1_1
0.6477
p.S292A
DO26431
LUSC
ICGC
DSGNDTS
DEG_SCF_TRCP1_1
0.6477
p.Q283H
TCGA-AP-A1DK
UCEC
TCGA
DSGNDTS
DEG_SCF_TRCP1_1
0.25
p.Q283H
DO42033
UCEC
ICGC
DSGNDTS
DEG_SCF_TRCP1_1
0.25
p.S282F
TCGA-06-5416
GBM
TCGA
DSGNDTS
DEG_SCF_TRCP1_1
0.2222
p.S282F
DO10880
GBM
ICGC
DSGNDTS
DEG_SCF_TRCP1_1
0.2222
p.R281L
DO229029
LICA
ICGC
DSGNDTS
DEG_SCF_TRCP1_1
0.1944
p.R279P
TCGA-55-8302
LUAD
TCGA
DSGNDTS
DEG_SCF_TRCP1_1
0.1389
p.R279P
DO45312
LUAD
ICGC
DSGNDTS
DEG_SCF_TRCP1_1
0.1389
p.S300N
TCGA-B5-A1MX
UCEC
TCGA
DSGNDTS
DEG_SCF_TRCP1_1
0.1111
p.S300N
DO41999
UCEC
ICGC
DSGNDTS
DEG_SCF_TRCP1_1
0.1111
p.A302S
TCGA-DK-A2I1
BLCA
TCGA
DSGNDTS
DEG_SCF_TRCP1_1
0.0556
p.A302S
DO444
BLCA
ICGC
DSGNDTS
DEG_SCF_TRCP1_1
0.0556
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Drug responses associated with SRRM4 mutations
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Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
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All proteins holding degron of DSGNDTS
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Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
A7MD48
Serine/arginine repetitive matrix protein 4
DEG_SCF_TRCP1_1
286:292
DSGNDTS
BTRC
0.9941
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