DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
DSGNDTS
Uniprot ID:
A7MD48
Source protein:
Serine/arginine repetitive matrix protein 4
Source gene:
SRRM4
Class:
DEG_SCF_TRCP1_1
Location:
286:292
E3 ligase:
BTRC
DEGRON score:
0.9941
ASA_SCORE:
92.0429
COIL:
0.9476
CONS_SCORE:
0.9615
DSS_SCORE:
0.7934
HELIX:
0.0391
FCONS_SCORE:
1.5032
RIG_SCORE:
0.5388
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S282F
TCGA-06-5416
GBM
TCGA
DSGNDTS
DEG_SCF_TRCP1_1
0.2222
p.S282F
DO10880
GBM
ICGC
DSGNDTS
DEG_SCF_TRCP1_1
0.2222
p.R279P
TCGA-55-8302
LUAD
TCGA
DSGNDTS
DEG_SCF_TRCP1_1
0.1389
p.R279P
DO45312
LUAD
ICGC
DSGNDTS
DEG_SCF_TRCP1_1
0.1389
p.G288E
TCGA-55-A494
LUAD
TCGA
DSGNDTS
DEG_SCF_TRCP1_1
0.7199
p.G288E
DO23794
LUAD
ICGC
DSGNDTS
DEG_SCF_TRCP1_1
0.7199
p.G288E
DO222837
MELA
ICGC
DSGNDTS
DEG_SCF_TRCP1_1
0.7199
p.S292A
TCGA-60-2708
LUSC
TCGA
DSGNDTS
DEG_SCF_TRCP1_1
0.6477
p.S292A
DO26431
LUSC
ICGC
DSGNDTS
DEG_SCF_TRCP1_1
0.6477
p.Q283H
TCGA-AP-A1DK
UCEC
TCGA
DSGNDTS
DEG_SCF_TRCP1_1
0.25
p.Q283H
DO42033
UCEC
ICGC
DSGNDTS
DEG_SCF_TRCP1_1
0.25
p.S300N
TCGA-B5-A1MX
UCEC
TCGA
DSGNDTS
DEG_SCF_TRCP1_1
0.1111
p.S300N
DO41999
UCEC
ICGC
DSGNDTS
DEG_SCF_TRCP1_1
0.1111
p.A302S
TCGA-DK-A2I1
BLCA
TCGA
DSGNDTS
DEG_SCF_TRCP1_1
0.0556
p.A302S
DO444
BLCA
ICGC
DSGNDTS
DEG_SCF_TRCP1_1
0.0556
p.D286N
DO233935
GACA
ICGC
DSGNDTS
DEG_SCF_TRCP1_1
0.6932
p.R281L
DO229029
LICA
ICGC
DSGNDTS
DEG_SCF_TRCP1_1
0.1944
p.S287L
SIDM01782
Oral Cavity Carcinoma
GDSC
DSGNDTS
DEG_SCF_TRCP1_1
0.7667
p.S287L
ACH-000723
Head and Neck Cancer
CCLE
DSGNDTS
DEG_SCF_TRCP1_1
0.7667
Drug responses associated with SRRM4 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of DSGNDTS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
A7MD48
Serine/arginine repetitive matrix protein 4
DEG_SCF_TRCP1_1
286:292
DSGNDTS
BTRC
0.9941
More...