DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
DSGNWDT
Uniprot ID:
O75400
Source protein:
Pre-mRNA-processing factor 40 homolog A
Source gene:
PRPF40A
Class:
DEG_SCF_TRCP1_1
Location:
926:932
E3 ligase:
BTRC
DEGRON score:
0.9784
ASA_SCORE:
88.3857
COIL:
0.8911
CONS_SCORE:
0.2763
DSS_SCORE:
0.659
HELIX:
0.0756
FCONS_SCORE:
1.0334
RIG_SCORE:
0.5664
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R918H
TCGA-AP-A1DK
UCEC
TCGA
DSGNWDT
DEG_SCF_TRCP1_1
0.1111
p.R918H
DO42033
UCEC
ICGC
DSGNWDT
DEG_SCF_TRCP1_1
0.1111
p.L922V
DO225233
BRCA
ICGC
DSGNWDT
DEG_SCF_TRCP1_1
0.3333
p.R918C
DO233737
GACA
ICGC
DSGNWDT
DEG_SCF_TRCP1_1
0.1111
p.R919G
DO45155
LIRI
ICGC
DSGNWDT
DEG_SCF_TRCP1_1
0.1389
p.D929Y
ACH-001303
Neuroblastoma
CCLE
DSGNWDT
DEG_SCF_TRCP1_1
0.7325
Drug responses associated with PRPF40A mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of DSGNWDT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O75400
Pre-mRNA-processing factor 40 homolog A
DEG_SCF_TRCP1_1
926:932
DSGNWDT
BTRC
0.9784
More...