DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
DSGPECT
Uniprot ID:
Q6ZMT4
Source protein:
Lysine-specific demethylase 7A
Source gene:
KDM7A
Class:
DEG_SCF_TRCP1_1
Location:
664:670
E3 ligase:
BTRC
DEGRON score:
0.998
ASA_SCORE:
76.6286
COIL:
0.8
CONS_SCORE:
0.3413
DSS_SCORE:
0.5641
HELIX:
0.1561
FCONS_SCORE:
1.0374
RIG_SCORE:
0.6504
Degron related mutations and impact score
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Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.E663A
SIDM00193
Colorectal Carcinoma
GDSC
DSGPECT
DEG_SCF_TRCP1_1
0.3056
p.E663A
SNU-81
large_intestine
COSMIC
DSGPECT
DEG_SCF_TRCP1_1
0.3056
p.I675V
TCGA-D6-A6EK
HNSC
TCGA
DSGPECT
DEG_SCF_TRCP1_1
0.1944
p.G655E
SIDM00129
Melanoma
GDSC
DSGPECT
DEG_SCF_TRCP1_1
0.0833
p.G655E
G-MEL
skin
COSMIC
DSGPECT
DEG_SCF_TRCP1_1
0.0833
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Drug responses associated with KDM7A mutations
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Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
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All proteins holding degron of DSGPECT
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Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q6ZMT4
Lysine-specific demethylase 7A
DEG_SCF_TRCP1_1
664:670
DSGPECT
BTRC
0.998
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