DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
DSGPLS
Uniprot ID:
Q7L2E3
Source protein:
ATP-dependent RNA helicase DHX30
Source gene:
DHX30
Class:
DEG_SCF_TRCP1_1
Location:
389:394
E3 ligase:
BTRC
DEGRON score:
0.7426
ASA_SCORE:
65.7167
COIL:
0.8408
CONS_SCORE:
0.3363
DSS_SCORE:
0.4775
HELIX:
0.0332
FCONS_SCORE:
0.9435
RIG_SCORE:
0.6123
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.D381N
TCGA-86-7713
LUAD
TCGA
DSGPLS
DEG_SCF_TRCP1_1
0.1111
p.G399D
TCGA-AX-A0J1
UCEC
TCGA
DSGPLS
DEG_SCF_TRCP1_1
0.1944
p.D395N
TCGA-DD-AADE
LIHC
TCGA
DSGPLS
DEG_SCF_TRCP1_1
0.3056
p.Q379H
TCGA-FJ-A3Z7
BLCA
TCGA
DSGPLS
DEG_SCF_TRCP1_1
0.0556
p.A401T
DO223732
CESC
ICGC
DSGPLS
DEG_SCF_TRCP1_1
0.1389
p.A401T
DO10324
COAD
ICGC
DSGPLS
DEG_SCF_TRCP1_1
0.1389
p.A401T
DO41361
UCEC
ICGC
DSGPLS
DEG_SCF_TRCP1_1
0.1389
p.E391Q
DO24712
LUAD
ICGC
DSGPLS
DEG_SCF_TRCP1_1
0.6744
p.R394W
DO47873
STAD
ICGC
DSGPLS
DEG_SCF_TRCP1_1
0.8634
p.R394W
DO41235
UCEC
ICGC
DSGPLS
DEG_SCF_TRCP1_1
0.8634
p.D402G
DO38192
STAD
ICGC
DSGPLS
DEG_SCF_TRCP1_1
0.1111
p.R384C
DO42320
UCEC
ICGC
DSGPLS
DEG_SCF_TRCP1_1
0.1944
p.D381H
SIDM00628
Breast Carcinoma
GDSC
DSGPLS
DEG_SCF_TRCP1_1
0.1111
p.D381H
MDA-MB-468
breast
COSMIC
DSGPLS
DEG_SCF_TRCP1_1
0.1111
p.R384H
ACH-002048
Sarcoma
CCLE
DSGPLS
DEG_SCF_TRCP1_1
0.1944
p.R384H
SNU-1040
large_intestine
COSMIC
DSGPLS
DEG_SCF_TRCP1_1
0.1944
p.V383A
ACH-002256
Leukemia
CCLE
DSGPLS
DEG_SCF_TRCP1_1
0.1667
p.V383A
KARPAS-45
haematopoietic_and_lymphoid_tissue
COSMIC
DSGPLS
DEG_SCF_TRCP1_1
0.1667
p.V383I
YT
haematopoietic_and_lymphoid_tissue
COSMIC
DSGPLS
DEG_SCF_TRCP1_1
0.1667
Drug responses associated with DHX30 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of DSGPLS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q7L2E3
ATP-dependent RNA helicase DHX30
DEG_SCF_TRCP1_1
389:394
DSGPLS
BTRC
0.7426
More...