DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
DSGPVS
Uniprot ID:
O15018
Source protein:
PDZ domain-containing protein 2
Source gene:
PDZD2
Class:
DEG_SCF_TRCP1_1
Location:
2032:2037
E3 ligase:
BTRC
DEGRON score:
0.9983
ASA_SCORE:
76.8667
COIL:
0.9495
CONS_SCORE:
0.4214
DSS_SCORE:
0.6954
HELIX:
0.0293
FCONS_SCORE:
1.3061
RIG_SCORE:
0.5673
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.C2022Y
TCGA-13-0905
OV
TCGA
DSGPVS
DEG_SCF_TRCP1_1
0.0556
p.C2022Y
DO31490
OV
ICGC
DSGPVS
DEG_SCF_TRCP1_1
0.0556
p.R2023K
TCGA-BH-A2L8
BRCA
TCGA
DSGPVS
DEG_SCF_TRCP1_1
0.0833
p.R2023K
DO44242
BRCA
ICGC
DSGPVS
DEG_SCF_TRCP1_1
0.0833
p.E2025Q
TCGA-DK-AA74
BLCA
TCGA
DSGPVS
DEG_SCF_TRCP1_1
0.1389
p.E2025Q
DO219011
BLCA
ICGC
DSGPVS
DEG_SCF_TRCP1_1
0.1389
p.A2039V
DO222769
COCA
ICGC
DSGPVS
DEG_SCF_TRCP1_1
0.2778
p.G2044S
DO234230
ESAD
ICGC
DSGPVS
DEG_SCF_TRCP1_1
0.1389
p.R2030H
DO233270
GACA
ICGC
DSGPVS
DEG_SCF_TRCP1_1
0.2778
p.V2047M
DO220844
MELA
ICGC
DSGPVS
DEG_SCF_TRCP1_1
0.0556
p.G2034R
SIDM01652
Non-Cancerous
GDSC
DSGPVS
DEG_SCF_TRCP1_1
0.7568
p.G2034R
SIDM00187
Kidney Carcinoma
GDSC
DSGPVS
DEG_SCF_TRCP1_1
0.7568
p.A2031V
SIDM00079
Ovarian Carcinoma
GDSC
DSGPVS
DEG_SCF_TRCP1_1
0.3056
p.A2031V
ACH-000811
Ovarian Cancer
CCLE
DSGPVS
DEG_SCF_TRCP1_1
0.3056
p.A2031V
SK-OV-3
ovary
COSMIC
DSGPVS
DEG_SCF_TRCP1_1
0.3056
p.P2035L
SIDM00451
T-Lymphoblastic Leukemia
GDSC
DSGPVS
DEG_SCF_TRCP1_1
0.6471
p.P2035L
PF-382
haematopoietic_and_lymphoid_tissue
COSMIC
DSGPVS
DEG_SCF_TRCP1_1
0.6471
Drug responses associated with PDZD2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of DSGPVS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O15018
PDZ domain-containing protein 2
DEG_SCF_TRCP1_1
2032:2037
DSGPVS
BTRC
0.9983
More...