DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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CGC
Degron:
DSGQVT
Uniprot ID:
P22223
Source protein:
Cadherin-3
Source gene:
CDH3
Class:
DEG_SCF_TRCP1_1
Location:
491:496
E3 ligase:
BTRC
DEGRON score:
0.6746
ASA_SCORE:
50.3167
COIL:
0.4727
CONS_SCORE:
0.543
DSS_SCORE:
0.4249
HELIX:
0.0117
FCONS_SCORE:
1.0992
RIG_SCORE:
0.7178
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.D502N
TCGA-95-7944
LUAD
TCGA
DSGQVT
DEG_SCF_TRCP1_1
0.1667
p.D502N
DO25163
LUAD
ICGC
DSGQVT
DEG_SCF_TRCP1_1
0.1667
p.D502G
TCGA-CG-5721
STAD
TCGA
DSGQVT
DEG_SCF_TRCP1_1
0.1667
p.D502G
DO38192
STAD
ICGC
DSGQVT
DEG_SCF_TRCP1_1
0.1667
p.R503C
TCGA-K4-A5RI
BLCA
TCGA
DSGQVT
DEG_SCF_TRCP1_1
0.1389
p.R503C
DO219029
BLCA
ICGC
DSGQVT
DEG_SCF_TRCP1_1
0.1389
p.R503C
DO234207
ESAD
ICGC
DSGQVT
DEG_SCF_TRCP1_1
0.1389
p.S492G
DO233154
GACA
ICGC
DSGQVT
DEG_SCF_TRCP1_1
0.8104
p.G499V
DO228952
LICA
ICGC
DSGQVT
DEG_SCF_TRCP1_1
0.25
p.Q494K
SIDM00653
Small Cell Lung Carcinoma
GDSC
DSGQVT
DEG_SCF_TRCP1_1
0.5833
p.Q494K
ACH-000514
Lung Cancer
CCLE
DSGQVT
DEG_SCF_TRCP1_1
0.5833
p.Q494K
NCI-H1092
lung
COSMIC
DSGQVT
DEG_SCF_TRCP1_1
0.5833
Drug responses associated with CDH3 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of DSGQVT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P22223
Cadherin-3
DEG_SCF_TRCP1_1
491:496
DSGQVT
BTRC
0.6746
More...