DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
DSGRDS
Uniprot ID:
P28702
Source protein:
Retinoic acid receptor RXR-beta
Source gene:
RXRB
Class:
DEG_SCF_TRCP1_1
Location:
75:80
E3 ligase:
BTRC
DEGRON score:
0.972
ASA_SCORE:
74.55
COIL:
0.8772
CONS_SCORE:
0.6495
DSS_SCORE:
0.9182
HELIX:
0.0537
FCONS_SCORE:
1.0461
RIG_SCORE:
0.4711
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R81Q
TCGA-AA-3984
COAD
TCGA
DSGRDS
DEG_SCF_TRCP1_1
0.3056
p.R81Q
DO9002
COAD
ICGC
DSGRDS
DEG_SCF_TRCP1_1
0.3056
p.D75N
TCGA-F7-A624
HNSC
TCGA
DSGRDS
DEG_SCF_TRCP1_1
0.6932
p.D75N
DO44440
HNSC
ICGC
DSGRDS
DEG_SCF_TRCP1_1
0.6932
p.I66F
DO9860
COAD
ICGC
DSGRDS
DEG_SCF_TRCP1_1
0.0833
p.G89R
DO234455
ESAD
ICGC
DSGRDS
DEG_SCF_TRCP1_1
0.0833
p.G78D
DO228138
PBCA
ICGC
DSGRDS
DEG_SCF_TRCP1_1
0.7198
p.G78A
DO222342
STAD
ICGC
DSGRDS
DEG_SCF_TRCP1_1
0.754
p.G78A
DO42977
UCEC
ICGC
DSGRDS
DEG_SCF_TRCP1_1
0.754
p.P90S
ACH-000987
Skin Cancer
CCLE
DSGRDS
DEG_SCF_TRCP1_1
0.0556
Drug responses associated with RXRB mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of DSGRDS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P28702
Retinoic acid receptor RXR-beta
DEG_SCF_TRCP1_1
75:80
DSGRDS
BTRC
0.972
More...