DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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Degron:
DSGREPS
Uniprot ID:
Q70EL1
Source protein:
Inactive ubiquitin carboxyl-terminal hydrolase 54
Source gene:
USP54
Class:
DEG_SCF_TRCP1_1
Location:
380:386
E3 ligase:
BTRC
DEGRON score:
0.9476
ASA_SCORE:
83.3857
COIL:
0.8436
CONS_SCORE:
0.436
DSS_SCORE:
0.6586
HELIX:
0.1134
FCONS_SCORE:
1.0148
RIG_SCORE:
0.5888
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.I387V
TCGA-21-1077
LUSC
TCGA
DSGREPS
DEG_SCF_TRCP1_1
0.3056
p.R392Q
TCGA-A5-A2K5
UCEC
TCGA
DSGREPS
DEG_SCF_TRCP1_1
0.1667
p.R392Q
TCGA-BS-A0UF
UCEC
TCGA
DSGREPS
DEG_SCF_TRCP1_1
0.1667
p.D394Y
TCGA-AJ-A3EL
UCEC
TCGA
DSGREPS
DEG_SCF_TRCP1_1
0.1111
p.Y371H
TCGA-CG-5728
STAD
TCGA
DSGREPS
DEG_SCF_TRCP1_1
0.0833
p.S372I
TCGA-E6-A1LZ
UCEC
TCGA
DSGREPS
DEG_SCF_TRCP1_1
0.1111
p.N377D
DO48566
BLCA
ICGC
DSGREPS
DEG_SCF_TRCP1_1
0.25
p.P370T
DO228926
LICA
ICGC
DSGREPS
DEG_SCF_TRCP1_1
0.0556
p.P390H
DO228948
LICA
ICGC
DSGREPS
DEG_SCF_TRCP1_1
0.2222
p.D388E
DO229019
LICA
ICGC
DSGREPS
DEG_SCF_TRCP1_1
0.7222
p.G384S
DO41644
UCEC
ICGC
DSGREPS
DEG_SCF_TRCP1_1
0.6993
p.T393I
SIDM00282
Colorectal Carcinoma
GDSC
DSGREPS
DEG_SCF_TRCP1_1
0.1389
p.T393I
ACH-000998
Colon/Colorectal Cancer
CCLE
DSGREPS
DEG_SCF_TRCP1_1
0.1389
p.T393I
CW-2
large_intestine
COSMIC
DSGREPS
DEG_SCF_TRCP1_1
0.1389
p.E384D
SIDM00438
B-Lymphoblastic Leukemia
GDSC
DSGREPS
DEG_SCF_TRCP1_1
0.5647
p.E384D
ACH-002275
Leukemia
CCLE
DSGREPS
DEG_SCF_TRCP1_1
0.5647
p.E384D
MN-60
haematopoietic_and_lymphoid_tissue
COSMIC
DSGREPS
DEG_SCF_TRCP1_1
0.5647
p.P375S
SW48
large_intestine
COSMIC
DSGREPS
DEG_SCF_TRCP1_1
0.1944
p.I390T
MFE-319
endometrium
COSMIC
DSGREPS
DEG_SCF_TRCP1_1
0.2222
Drug responses associated with USP54 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of DSGREPS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q70EL1
Inactive ubiquitin carboxyl-terminal hydrolase 54
DEG_SCF_TRCP1_1
380:386
DSGREPS
BTRC
0.9476
More...