DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
DSGRFS
Uniprot ID:
Q2VWP7
Source protein:
Protogenin
Source gene:
PRTG
Class:
DEG_SCF_TRCP1_1
Location:
1125:1130
E3 ligase:
BTRC
DEGRON score:
0.9904
ASA_SCORE:
80.5833
COIL:
0.8312
CONS_SCORE:
0.5758
DSS_SCORE:
0.7145
HELIX:
0.0898
FCONS_SCORE:
1.1666
RIG_SCORE:
0.5702
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.D1135N
TCGA-AX-A05Z
UCEC
TCGA
DSGRFS
DEG_SCF_TRCP1_1
0.1944
p.D1135N
TCGA-BR-4256
STAD
TCGA
DSGRFS
DEG_SCF_TRCP1_1
0.1944
p.D1135N
DO38743
STAD
ICGC
DSGRFS
DEG_SCF_TRCP1_1
0.1944
p.D1135N
DO40884
UCEC
ICGC
DSGRFS
DEG_SCF_TRCP1_1
0.1944
p.R1128W
TCGA-BR-8081
STAD
TCGA
DSGRFS
DEG_SCF_TRCP1_1
0.7523
p.R1128W
TCGA-MX-A5UJ
STAD
TCGA
DSGRFS
DEG_SCF_TRCP1_1
0.7523
p.R1128W
DO232761
PBCA
ICGC
DSGRFS
DEG_SCF_TRCP1_1
0.7523
p.R1128W
DO48547
STAD
ICGC
DSGRFS
DEG_SCF_TRCP1_1
0.7523
p.R1128W
DO38795
STAD
ICGC
DSGRFS
DEG_SCF_TRCP1_1
0.7523
p.G1127V
TCGA-DX-AB2W
SARC
TCGA
DSGRFS
DEG_SCF_TRCP1_1
0.7532
p.G1127V
DO220095
SARC
ICGC
DSGRFS
DEG_SCF_TRCP1_1
0.7532
p.H1131N
TCGA-G2-A3IE
BLCA
TCGA
DSGRFS
DEG_SCF_TRCP1_1
0.3056
p.H1131N
DO767
BLCA
ICGC
DSGRFS
DEG_SCF_TRCP1_1
0.3056
p.D1135H
DO218506
BRCA
ICGC
DSGRFS
DEG_SCF_TRCP1_1
0.1944
p.E1122K
DO50339
ESAD
ICGC
DSGRFS
DEG_SCF_TRCP1_1
0.25
p.S1133F
DO48218
ESCA
ICGC
DSGRFS
DEG_SCF_TRCP1_1
0.25
p.S1130T
DO228474
LICA
ICGC
DSGRFS
DEG_SCF_TRCP1_1
0.6005
p.S1130T
DO228806
LICA
ICGC
DSGRFS
DEG_SCF_TRCP1_1
0.6005
p.H1121N
DO229024
LICA
ICGC
DSGRFS
DEG_SCF_TRCP1_1
0.2222
p.S1120I
SIDM02050
Colorectal Carcinoma
GDSC
DSGRFS
DEG_SCF_TRCP1_1
0.1944
p.A1115T
SIDM00217
Colorectal Carcinoma
GDSC
DSGRFS
DEG_SCF_TRCP1_1
0.0556
p.A1115T
ACH-000999
Colon/Colorectal Cancer
CCLE
DSGRFS
DEG_SCF_TRCP1_1
0.0556
p.A1115T
SNU-1040
large_intestine
COSMIC
DSGRFS
DEG_SCF_TRCP1_1
0.0556
p.S1140P
SIDM01770
Gastric Carcinoma
GDSC
DSGRFS
DEG_SCF_TRCP1_1
0.0556
p.S1140P
ACH-000908
Gastric Cancer
CCLE
DSGRFS
DEG_SCF_TRCP1_1
0.0556
Drug responses associated with PRTG mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of DSGRFS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q2VWP7
Protogenin
DEG_SCF_TRCP1_1
1125:1130
DSGRFS
BTRC
0.9904
More...