DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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Degron:
DSGRKPS
Uniprot ID:
Q5JR98
Source protein:
Dynein light chain Tctex-type 4
Source gene:
DYNLT4
Class:
DEG_SCF_TRCP1_1
Location:
18:24
E3 ligase:
BTRC
DEGRON score:
0.8951
ASA_SCORE:
97.0857
COIL:
0.9383
CONS_SCORE:
0.3148
DSS_SCORE:
0.7798
HELIX:
0.0517
FCONS_SCORE:
1.0179
RIG_SCORE:
0.5417
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R27Q
TCGA-2W-A8YY
CESC
TCGA
DSGRKPS
DEG_SCF_TRCP1_1
0.25
p.R27Q
DO223732
CESC
ICGC
DSGRKPS
DEG_SCF_TRCP1_1
0.25
p.R21W
TCGA-32-2616
GBM
TCGA
DSGRKPS
DEG_SCF_TRCP1_1
0.7523
p.R21W
DO13462
GBM
ICGC
DSGRKPS
DEG_SCF_TRCP1_1
0.7523
p.G9V
TCGA-DU-6404
LGG
TCGA
DSGRKPS
DEG_SCF_TRCP1_1
0.0833
p.G9V
DO22207
LGG
ICGC
DSGRKPS
DEG_SCF_TRCP1_1
0.0833
p.R27G
TCGA-EO-A22U
UCEC
TCGA
DSGRKPS
DEG_SCF_TRCP1_1
0.25
p.R27G
DO43755
UCEC
ICGC
DSGRKPS
DEG_SCF_TRCP1_1
0.25
p.R10S
TCGA-Q1-A73P
CESC
TCGA
DSGRKPS
DEG_SCF_TRCP1_1
0.1111
p.R10S
DO49983
CESC
ICGC
DSGRKPS
DEG_SCF_TRCP1_1
0.1111
p.R27W
DO233111
GACA
ICGC
DSGRKPS
DEG_SCF_TRCP1_1
0.25
p.E13K
DO37474
SKCM
ICGC
DSGRKPS
DEG_SCF_TRCP1_1
0.1944
p.V26A
DO229253
THCA
ICGC
DSGRKPS
DEG_SCF_TRCP1_1
0.2778
p.R10H
ACH-000958
Colon/Colorectal Cancer
CCLE
DSGRKPS
DEG_SCF_TRCP1_1
0.1111
p.R10H
SW48
large_intestine
COSMIC
DSGRKPS
DEG_SCF_TRCP1_1
0.1111
Drug responses associated with DYNLT4 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of DSGRKPS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q5JR98
Dynein light chain Tctex-type 4
DEG_SCF_TRCP1_1
18:24
DSGRKPS
BTRC
0.8951
More...