DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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CGC
Degron:
DSGRPHS
Uniprot ID:
P11215
Source protein:
Integrin alpha-M
Source gene:
ITGAM
Class:
DEG_SCF_TRCP1_1
Location:
681:687
E3 ligase:
BTRC
DEGRON score:
0.9482
ASA_SCORE:
67
COIL:
0.7294
CONS_SCORE:
0.4478
DSS_SCORE:
0.4005
HELIX:
0.0137
FCONS_SCORE:
0.8396
RIG_SCORE:
0.6727
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R689H
TCGA-B5-A3FA
UCEC
TCGA
DSGRPHS
DEG_SCF_TRCP1_1
0.2778
p.R689H
SIDM00422
Hodgkin's Lymphoma
GDSC
DSGRPHS
DEG_SCF_TRCP1_1
0.2778
p.R689H
SUP-HD1
haematopoietic_and_lymphoid_tissue
COSMIC
DSGRPHS
DEG_SCF_TRCP1_1
0.2778
p.G683S
DO227900
COCA
ICGC
DSGRPHS
DEG_SCF_TRCP1_1
0.6993
p.V690I
DO50330
ESAD
ICGC
DSGRPHS
DEG_SCF_TRCP1_1
0.25
p.S687F
DO220908
MELA
ICGC
DSGRPHS
DEG_SCF_TRCP1_1
0.7982
p.S687F
DO222714
MELA
ICGC
DSGRPHS
DEG_SCF_TRCP1_1
0.7982
p.R684L
DO234063
THCA
ICGC
DSGRPHS
DEG_SCF_TRCP1_1
0.7316
p.R688H
DO52402
UCEC
ICGC
DSGRPHS
DEG_SCF_TRCP1_1
0.3056
p.R688H
ACH-001203
Lymphoma
CCLE
DSGRPHS
DEG_SCF_TRCP1_1
0.3056
p.R688H
SUP-HD1
haematopoietic_and_lymphoid_tissue
COSMIC
DSGRPHS
DEG_SCF_TRCP1_1
0.3056
p.S697R
DO41235
UCEC
ICGC
DSGRPHS
DEG_SCF_TRCP1_1
0.0556
p.P686S
SIDM00189
Melanoma
GDSC
DSGRPHS
DEG_SCF_TRCP1_1
0.6752
p.P686S
CP67-MEL
skin
COSMIC
DSGRPHS
DEG_SCF_TRCP1_1
0.6752
p.A690S
SIDM00120
Prostate Carcinoma
GDSC
DSGRPHS
DEG_SCF_TRCP1_1
0.25
p.A690S
DU-145
prostate
COSMIC
DSGRPHS
DEG_SCF_TRCP1_1
0.25
p.R689S
SIDM00945
Colorectal Carcinoma
GDSC
DSGRPHS
DEG_SCF_TRCP1_1
0.2778
p.R689S
CL-34
large_intestine
COSMIC
DSGRPHS
DEG_SCF_TRCP1_1
0.2778
p.H687L
SIDM00889
Cervical Carcinoma
GDSC
DSGRPHS
DEG_SCF_TRCP1_1
0.7313
p.H687L
ACH-001333
Cervical Cancer
CCLE
DSGRPHS
DEG_SCF_TRCP1_1
0.7313
p.H687L
C-33-A
cervix
COSMIC
DSGRPHS
DEG_SCF_TRCP1_1
0.7313
p.R688S
ACH-000895
Colon/Colorectal Cancer
CCLE
DSGRPHS
DEG_SCF_TRCP1_1
0.3056
p.R688S
CL-34
large_intestine
COSMIC
DSGRPHS
DEG_SCF_TRCP1_1
0.3056
p.A689S
ACH-000979
Prostate Cancer
CCLE
DSGRPHS
DEG_SCF_TRCP1_1
0.2778
p.A689S
DU-145
prostate
COSMIC
DSGRPHS
DEG_SCF_TRCP1_1
0.2778
p.P685S
ACH-002098
Skin Cancer
CCLE
DSGRPHS
DEG_SCF_TRCP1_1
0.5641
p.P685S
CP67-MEL
skin
COSMIC
DSGRPHS
DEG_SCF_TRCP1_1
0.5641
p.H686L
C-33-A
cervix
COSMIC
DSGRPHS
DEG_SCF_TRCP1_1
0.6202
Drug responses associated with ITGAM mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of DSGRPHS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P11215
Integrin alpha-M
DEG_SCF_TRCP1_1
681:687
DSGRPHS
BTRC
0.9482
More...