DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
DSGSDSS
Uniprot ID:
Q14137
Source protein:
Ribosome biogenesis protein BOP1
Source gene:
BOP1
Class:
DEG_SCF_TRCP1_1
Location:
65:71
E3 ligase:
BTRC
DEGRON score:
0.9335
ASA_SCORE:
86.9429
COIL:
0.9261
CONS_SCORE:
0.2889
DSS_SCORE:
0.8812
HELIX:
0.0536
FCONS_SCORE:
1.0566
RIG_SCORE:
0.528
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.D74N
TCGA-2Y-A9H4
LIHC
TCGA
DSGSDSS
DEG_SCF_TRCP1_1
0.25
p.D65Y
TCGA-37-3783
LUSC
TCGA
DSGSDSS
DEG_SCF_TRCP1_1
0.7325
p.D65Y
DO26734
LUSC
ICGC
DSGSDSS
DEG_SCF_TRCP1_1
0.7325
p.D73Y
TCGA-55-A492
LUAD
TCGA
DSGSDSS
DEG_SCF_TRCP1_1
0.2778
p.D73Y
DO23708
LUAD
ICGC
DSGSDSS
DEG_SCF_TRCP1_1
0.2778
p.G67S
TCGA-AP-A0LS
UCEC
TCGA
DSGSDSS
DEG_SCF_TRCP1_1
0.6993
p.G67S
DO43178
UCEC
ICGC
DSGSDSS
DEG_SCF_TRCP1_1
0.6993
p.E76K
TCGA-AR-A0TZ
BRCA
TCGA
DSGSDSS
DEG_SCF_TRCP1_1
0.1944
p.E76K
TCGA-S5-A6DX
BLCA
TCGA
DSGSDSS
DEG_SCF_TRCP1_1
0.1944
p.E76K
DO51903
BLCA
ICGC
DSGSDSS
DEG_SCF_TRCP1_1
0.1944
p.E76K
DO2287
BRCA
ICGC
DSGSDSS
DEG_SCF_TRCP1_1
0.1944
p.E76K
ACH-001411
Bladder Cancer
CCLE
DSGSDSS
DEG_SCF_TRCP1_1
0.1944
p.D78N
TCGA-BT-A20J
BLCA
TCGA
DSGSDSS
DEG_SCF_TRCP1_1
0.1389
p.D78N
DO457
BLCA
ICGC
DSGSDSS
DEG_SCF_TRCP1_1
0.1389
p.D78N
DO33084
PACA
ICGC
DSGSDSS
DEG_SCF_TRCP1_1
0.1389
p.E79K
TCGA-FW-A3R5
SKCM
TCGA
DSGSDSS
DEG_SCF_TRCP1_1
0.1111
p.E79K
DO37406
SKCM
ICGC
DSGSDSS
DEG_SCF_TRCP1_1
0.1111
p.S70N
TCGA-IB-7651
PAAD
TCGA
DSGSDSS
DEG_SCF_TRCP1_1
0.5958
p.S70N
DO46657
PAAD
ICGC
DSGSDSS
DEG_SCF_TRCP1_1
0.5958
p.T62I
ACH-000140
Lymphoma
CCLE
DSGSDSS
DEG_SCF_TRCP1_1
0.25
p.T62I
ACH-000571
Brain Cancer
CCLE
DSGSDSS
DEG_SCF_TRCP1_1
0.25
p.T62I
ACH-000931
Skin Cancer
CCLE
DSGSDSS
DEG_SCF_TRCP1_1
0.25
Drug responses associated with BOP1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of DSGSDSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q14137
Ribosome biogenesis protein BOP1
DEG_SCF_TRCP1_1
65:71
DSGSDSS
BTRC
0.9335
More...