DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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Degron:
DSGSNT
Uniprot ID:
Q9NX36
Source protein:
DnaJ homolog subfamily C member 28
Source gene:
DNAJC28
Class:
DEG_SCF_TRCP1_1
Location:
81:86
E3 ligase:
BTRC
DEGRON score:
0.9582
ASA_SCORE:
79.7667
COIL:
0.8327
CONS_SCORE:
0.6243
DSS_SCORE:
0.4189
HELIX:
0.1498
FCONS_SCORE:
1.0478
RIG_SCORE:
0.618
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P80S
TCGA-06-5416
GBM
TCGA
DSGSNT
DEG_SCF_TRCP1_1
0.3056
p.P80S
DO10880
GBM
ICGC
DSGSNT
DEG_SCF_TRCP1_1
0.3056
p.D88H
TCGA-60-2707
LUSC
TCGA
DSGSNT
DEG_SCF_TRCP1_1
0.2778
p.D88H
DO26926
LUSC
ICGC
DSGSNT
DEG_SCF_TRCP1_1
0.2778
p.K76N
TCGA-CA-6717
COAD
TCGA
DSGSNT
DEG_SCF_TRCP1_1
0.3056
p.K76N
DO8264
COAD
ICGC
DSGSNT
DEG_SCF_TRCP1_1
0.3056
p.N85T
TCGA-E6-A1LX
UCEC
TCGA
DSGSNT
DEG_SCF_TRCP1_1
0.5944
p.N85T
DO41020
UCEC
ICGC
DSGSNT
DEG_SCF_TRCP1_1
0.5944
p.E96Q
TCGA-QK-A6II
HNSC
TCGA
DSGSNT
DEG_SCF_TRCP1_1
0.0556
p.E96Q
DO50006
HNSC
ICGC
DSGSNT
DEG_SCF_TRCP1_1
0.0556
p.S89F
DO50671
ORCA
ICGC
DSGSNT
DEG_SCF_TRCP1_1
0.25
p.T86I
SIDM01125
Non-Small Cell Lung Carcinoma
GDSC
DSGSNT
DEG_SCF_TRCP1_1
0.7078
p.L74F
SIDM00956
Esophageal Squamous Cell Carcinoma
GDSC
DSGSNT
DEG_SCF_TRCP1_1
0.1389
p.L74F
ACH-000717
Esophageal Cancer
CCLE
DSGSNT
DEG_SCF_TRCP1_1
0.1389
p.L74F
COLO-680N
oesophagus
COSMIC
DSGSNT
DEG_SCF_TRCP1_1
0.1389
Drug responses associated with DNAJC28 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of DSGSNT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9NX36
DnaJ homolog subfamily C member 28
DEG_SCF_TRCP1_1
81:86
DSGSNT
BTRC
0.9582
More...