DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
DSGSPAT
Uniprot ID:
Q01955
Source protein:
Collagen alpha-3
Source gene:
COL4A3
Class:
DEG_SCF_TRCP1_1
Location:
1434:1440
E3 ligase:
BTRC
DEGRON score:
0.9916
ASA_SCORE:
63.1
COIL:
0.8881
CONS_SCORE:
0.5211
DSS_SCORE:
0.5829
HELIX:
0.0197
FCONS_SCORE:
0.8965
RIG_SCORE:
0.6117
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.W1441L
TCGA-D3-A2JC
SKCM
TCGA
DSGSPAT
DEG_SCF_TRCP1_1
0.3056
p.W1441L
DO229031
LICA
ICGC
DSGSPAT
DEG_SCF_TRCP1_1
0.3056
p.W1441L
DO47578
SKCM
ICGC
DSGSPAT
DEG_SCF_TRCP1_1
0.3056
p.G1430R
TCGA-D6-6516
HNSC
TCGA
DSGSPAT
DEG_SCF_TRCP1_1
0.2222
p.G1430R
DO15623
HNSC
ICGC
DSGSPAT
DEG_SCF_TRCP1_1
0.2222
p.P1438H
TCGA-VQ-A8PO
STAD
TCGA
DSGSPAT
DEG_SCF_TRCP1_1
0.6583
p.P1438H
DO51773
STAD
ICGC
DSGSPAT
DEG_SCF_TRCP1_1
0.6583
p.G1433R
DO222843
MELA
ICGC
DSGSPAT
DEG_SCF_TRCP1_1
0.3056
p.V1447A
SIDM00697
Small Cell Lung Carcinoma
GDSC
DSGSPAT
DEG_SCF_TRCP1_1
0.1389
p.V1447A
ACH-000830
Lung Cancer
CCLE
DSGSPAT
DEG_SCF_TRCP1_1
0.1389
p.V1447A
NCI-H1436
lung
COSMIC
DSGSPAT
DEG_SCF_TRCP1_1
0.1389
Drug responses associated with COL4A3 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of DSGSPAT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q01955
Collagen alpha-3
DEG_SCF_TRCP1_1
1434:1440
DSGSPAT
BTRC
0.9916
More...