DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
DSGSQAVPSP
Uniprot ID:
Q12888
Source protein:
TP53-binding protein 1
Source gene:
TP53BP1
Class:
DEG_COP1_1
Location:
622:631
E3 ligase:
COP1
DEGRON score:
0.9928
ASA_SCORE:
88.37
COIL:
0.9351
CONS_SCORE:
0.3374
DSS_SCORE:
0.4439
HELIX:
0.0344
FCONS_SCORE:
1.0459
RIG_SCORE:
0.6818
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P634L
TCGA-32-2616
GBM
TCGA
DSGSQAVPSP
DEG_COP1_1
0.25
p.R639Q
TCGA-A5-A2K5
UCEC
TCGA
DSGSQAVPSP
DEG_COP1_1
0.5556
p.R639Q
SIDM00683
Prostate Carcinoma
GDSC
DSGSQAVPSP
DEG_COP1_1
0.5556
p.R639Q
LNCaP-Clone-FGC
prostate
COSMIC
DSGSQAVPSP
DEG_COP1_1
0.5556
p.S640F
TCGA-AO-A03M
BRCA
TCGA
DSGSQAVPSP
DEG_COP1_1
0.5278
p.S635F
DO2216
BRCA
ICGC
DSGSQAVPSP
DEG_COP1_1
0.6667
p.P629L
DO13462
GBM
ICGC
DSGSQAVPSP
DEG_COP1_1
0.7582
p.R634Q
DO41379
UCEC
ICGC
DSGSQAVPSP
DEG_COP1_1
0.25
p.R634Q
LNCaP-Clone-FGC
prostate
COSMIC
DSGSQAVPSP
DEG_COP1_1
0.25
Drug responses associated with TP53BP1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of DSGSQAVPSP
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q12888
TP53-binding protein 1
DEG_COP1_1
622:631
DSGSQAVPSP
COP1
0.9928
More...