DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
DSGSSAT
Uniprot ID:
Q96SN8
Source protein:
CDK5 regulatory subunit-associated protein 2
Source gene:
CDK5RAP2
Class:
DEG_SCF_TRCP1_1
Location:
1698:1704
E3 ligase:
BTRC
DEGRON score:
0.9824
ASA_SCORE:
81.4571
COIL:
0.9331
CONS_SCORE:
0.3245
DSS_SCORE:
0.414
HELIX:
0.0469
FCONS_SCORE:
0.9209
RIG_SCORE:
0.6139
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.D1698N
TCGA-B5-A3FA
UCEC
TCGA
DSGSSAT
DEG_SCF_TRCP1_1
0.6932
p.D1698N
DO52402
UCEC
ICGC
DSGSSAT
DEG_SCF_TRCP1_1
0.6932
p.P1707L
TCGA-D9-A6EC
SKCM
TCGA
DSGSSAT
DEG_SCF_TRCP1_1
0.25
p.P1707L
DO222955
BTCA
ICGC
DSGSSAT
DEG_SCF_TRCP1_1
0.25
p.P1707L
DO50291
SKCM
ICGC
DSGSSAT
DEG_SCF_TRCP1_1
0.25
p.P1707S
TCGA-EE-A182
SKCM
TCGA
DSGSSAT
DEG_SCF_TRCP1_1
0.25
p.P1707S
DO37814
SKCM
ICGC
DSGSSAT
DEG_SCF_TRCP1_1
0.25
p.R1711C
TCGA-G4-6293
COAD
TCGA
DSGSSAT
DEG_SCF_TRCP1_1
0.1389
p.R1711C
DO10405
COAD
ICGC
DSGSSAT
DEG_SCF_TRCP1_1
0.1389
p.P1707Q
TCGA-G4-6628
COAD
TCGA
DSGSSAT
DEG_SCF_TRCP1_1
0.25
p.P1707Q
DO10132
COAD
ICGC
DSGSSAT
DEG_SCF_TRCP1_1
0.25
p.D1693N
TCGA-HU-A4GN
STAD
TCGA
DSGSSAT
DEG_SCF_TRCP1_1
0.1944
p.D1693N
DO47833
STAD
ICGC
DSGSSAT
DEG_SCF_TRCP1_1
0.1944
p.D1691E
DO229028
LICA
ICGC
DSGSSAT
DEG_SCF_TRCP1_1
0.1389
p.T1692K
DO229022
LICA
ICGC
DSGSSAT
DEG_SCF_TRCP1_1
0.1667
p.P1707T
DO229045
LICA
ICGC
DSGSSAT
DEG_SCF_TRCP1_1
0.25
p.S1710P
DO219881
SKCA
ICGC
DSGSSAT
DEG_SCF_TRCP1_1
0.1667
p.S1710F
DO229462
SKCA
ICGC
DSGSSAT
DEG_SCF_TRCP1_1
0.1667
p.V1713I
SIDM00447
B-Lymphoblastic Leukemia
GDSC
DSGSSAT
DEG_SCF_TRCP1_1
0.0833
p.V1713I
ACH-000960
Leukemia
CCLE
DSGSSAT
DEG_SCF_TRCP1_1
0.0833
p.V1713I
REH
haematopoietic_and_lymphoid_tissue
COSMIC
DSGSSAT
DEG_SCF_TRCP1_1
0.0833
p.K1690N
SNU-81
large_intestine
COSMIC
DSGSSAT
DEG_SCF_TRCP1_1
0.1111
p.P1696L
RVH-421
skin
COSMIC
DSGSSAT
DEG_SCF_TRCP1_1
0.2778
Drug responses associated with CDK5RAP2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of DSGSSAT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q96SN8
CDK5 regulatory subunit-associated protein 2
DEG_SCF_TRCP1_1
1698:1704
DSGSSAT
BTRC
0.9824
More...