DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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CGC
Degron:
DSGSSKS
Uniprot ID:
Q7Z5M5
Source protein:
Transmembrane channel-like protein 3
Source gene:
TMC3
Class:
DEG_SCF_TRCP1_1
Location:
775:781
E3 ligase:
BTRC
DEGRON score:
0.9534
ASA_SCORE:
80.5571
COIL:
0.8954
CONS_SCORE:
0.3875
DSS_SCORE:
0.6708
HELIX:
0.0643
FCONS_SCORE:
1.0087
RIG_SCORE:
0.5742
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.K780N
TCGA-78-7152
LUAD
TCGA
DSGSSKS
DEG_SCF_TRCP1_1
0.5806
p.M791I
TCGA-AP-A1DK
UCEC
TCGA
DSGSSKS
DEG_SCF_TRCP1_1
0.0556
p.A788T
TCGA-VM-A8CA
LGG
TCGA
DSGSSKS
DEG_SCF_TRCP1_1
0.1389
p.G770D
DO228319
BRCA
ICGC
DSGSSKS
DEG_SCF_TRCP1_1
0.1944
p.A789T
DO50248
LGG
ICGC
DSGSSKS
DEG_SCF_TRCP1_1
0.1111
p.S780R
DO228948
LICA
ICGC
DSGSSKS
DEG_SCF_TRCP1_1
0.7427
p.N769K
DO228952
LICA
ICGC
DSGSSKS
DEG_SCF_TRCP1_1
0.1667
p.P766H
DO229045
LICA
ICGC
DSGSSKS
DEG_SCF_TRCP1_1
0.0833
p.K781N
DO23560
LUAD
ICGC
DSGSSKS
DEG_SCF_TRCP1_1
0.6918
p.T765I
DO42608
UCEC
ICGC
DSGSSKS
DEG_SCF_TRCP1_1
0.0556
p.N768S
SIDM01090
Colorectal Carcinoma
GDSC
DSGSSKS
DEG_SCF_TRCP1_1
0.1389
p.N768S
ACH-000943
Colon/Colorectal Cancer
CCLE
DSGSSKS
DEG_SCF_TRCP1_1
0.1389
p.N768S
RKO
large_intestine
COSMIC
DSGSSKS
DEG_SCF_TRCP1_1
0.1389
p.G777E
SIDM00151
Ovarian Carcinoma
GDSC
DSGSSKS
DEG_SCF_TRCP1_1
0.7199
p.G777E
ACH-000966
Ovarian Cancer
CCLE
DSGSSKS
DEG_SCF_TRCP1_1
0.7199
p.G777E
IGROV-1
ovary
COSMIC
DSGSSKS
DEG_SCF_TRCP1_1
0.7199
p.I784T
SIDM00112
Kidney Carcinoma
GDSC
DSGSSKS
DEG_SCF_TRCP1_1
0.25
p.I784T
ACH-000428
Kidney Cancer
CCLE
DSGSSKS
DEG_SCF_TRCP1_1
0.25
p.I784T
U031
kidney
COSMIC
DSGSSKS
DEG_SCF_TRCP1_1
0.25
p.E785K
SIDM01052
Ovarian Carcinoma
GDSC
DSGSSKS
DEG_SCF_TRCP1_1
0.2222
p.E785K
ACH-000308
Ovarian Cancer
CCLE
DSGSSKS
DEG_SCF_TRCP1_1
0.2222
p.E785K
EFO-21
ovary
COSMIC
DSGSSKS
DEG_SCF_TRCP1_1
0.2222
p.N769S
RKO
large_intestine
COSMIC
DSGSSKS
DEG_SCF_TRCP1_1
0.1667
p.I785T
U031
kidney
COSMIC
DSGSSKS
DEG_SCF_TRCP1_1
0.2222
p.E786K
EFO-21
ovary
COSMIC
DSGSSKS
DEG_SCF_TRCP1_1
0.1944
p.G778E
IGROV-1
ovary
COSMIC
DSGSSKS
DEG_SCF_TRCP1_1
0.7199
Drug responses associated with TMC3 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of DSGSSKS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q7Z5M5
Transmembrane channel-like protein 3
DEG_SCF_TRCP1_1
775:781
DSGSSKS
BTRC
0.9534
More...