DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
DSGSVHS
Uniprot ID:
Q12873
Source protein:
Chromodomain-helicase-DNA-binding protein 3
Source gene:
CHD3
Class:
DEG_SCF_TRCP1_1
Location:
327:333
E3 ligase:
BTRC
DEGRON score:
0.8384
ASA_SCORE:
82.5714
COIL:
0.8649
CONS_SCORE:
0.2339
DSS_SCORE:
0.7456
HELIX:
0.1049
FCONS_SCORE:
0.9775
RIG_SCORE:
0.567
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R335Q
TCGA-A5-A1OF
UCEC
TCGA
DSGSVHS
DEG_SCF_TRCP1_1
0.7222
p.R335Q
TCGA-CG-5718
STAD
TCGA
DSGSVHS
DEG_SCF_TRCP1_1
0.7222
p.D338H
TCGA-A8-A0AB
BRCA
TCGA
DSGSVHS
DEG_SCF_TRCP1_1
0.1944
p.G326D
TCGA-B5-A11E
UCEC
TCGA
DSGSVHS
DEG_SCF_TRCP1_1
0.3056
p.R343C
DO233270
GACA
ICGC
DSGSVHS
DEG_SCF_TRCP1_1
0.0556
p.R343C
DO42600
UCEC
ICGC
DSGSVHS
DEG_SCF_TRCP1_1
0.0556
p.G340C
DO23711
LUAD
ICGC
DSGSVHS
DEG_SCF_TRCP1_1
0.1389
p.E320K
DO45384
LUAD
ICGC
DSGSVHS
DEG_SCF_TRCP1_1
0.1389
p.D338N
SIDM00923
Cervical Carcinoma
GDSC
DSGSVHS
DEG_SCF_TRCP1_1
0.1944
p.D338N
ACH-001336
Cervical Cancer
CCLE
DSGSVHS
DEG_SCF_TRCP1_1
0.1944
p.D338N
Ca-Ski
cervix
COSMIC
DSGSVHS
DEG_SCF_TRCP1_1
0.1944
p.K341T
ACH-000612
Lymphoma
CCLE
DSGSVHS
DEG_SCF_TRCP1_1
0.1111
p.K341T
ACH-001992
Primary
CCLE
DSGSVHS
DEG_SCF_TRCP1_1
0.1111
Drug responses associated with CHD3 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of DSGSVHS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q12873
Chromodomain-helicase-DNA-binding protein 3
DEG_SCF_TRCP1_1
327:333
DSGSVHS
BTRC
0.8384
More...