DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
DSGTRS
Uniprot ID:
O15056
Source protein:
Synaptojanin-2
Source gene:
SYNJ2
Class:
DEG_SCF_TRCP1_1
Location:
1438:1443
E3 ligase:
BTRC
DEGRON score:
0.9961
ASA_SCORE:
82.5167
COIL:
0.9427
CONS_SCORE:
0.3335
DSS_SCORE:
0.6447
HELIX:
0.0358
FCONS_SCORE:
0.9957
RIG_SCORE:
0.5721
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.D1435N
TCGA-2G-AAGV
TGCT
TCGA
DSGTRS
DEG_SCF_TRCP1_1
0.25
p.G1440E
TCGA-CZ-4866
KIRC
TCGA
DSGTRS
DEG_SCF_TRCP1_1
0.7199
p.G1440E
DO16218
KIRC
ICGC
DSGTRS
DEG_SCF_TRCP1_1
0.7199
p.P1444H
TCGA-EE-A29E
SKCM
TCGA
DSGTRS
DEG_SCF_TRCP1_1
0.3056
p.P1444H
DO37831
SKCM
ICGC
DSGTRS
DEG_SCF_TRCP1_1
0.3056
p.W1429C
DO229028
LICA
ICGC
DSGTRS
DEG_SCF_TRCP1_1
0.0833
p.D1438Y
DO229045
LICA
ICGC
DSGTRS
DEG_SCF_TRCP1_1
0.7325
p.L1430F
SIDM00291
Melanoma
GDSC
DSGTRS
DEG_SCF_TRCP1_1
0.1111
p.L1430F
HMV-II
skin
COSMIC
DSGTRS
DEG_SCF_TRCP1_1
0.1111
p.K1445R
SIDM00415
B-Cell Non-Hodgkin's Lymphoma
GDSC
DSGTRS
DEG_SCF_TRCP1_1
0.2778
p.K1445R
ACH-001639
Leukemia
CCLE
DSGTRS
DEG_SCF_TRCP1_1
0.2778
p.K1445R
ROS-50
haematopoietic_and_lymphoid_tissue
COSMIC
DSGTRS
DEG_SCF_TRCP1_1
0.2778
p.D1447H
ACH-000338
Lymphoma
CCLE
DSGTRS
DEG_SCF_TRCP1_1
0.2222
Drug responses associated with SYNJ2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of DSGTRS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O15056
Synaptojanin-2
DEG_SCF_TRCP1_1
1438:1443
DSGTRS
BTRC
0.9961
More...