DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
DSGVAST
Uniprot ID:
Q9NQX3
Source protein:
Gephyrin [Includes: Molybdopterin adenylyltransferase
Source gene:
GPHN
Class:
DEG_SCF_TRCP1_1
Location:
221:227
E3 ligase:
BTRC
DEGRON score:
0.9985
ASA_SCORE:
70.3857
COIL:
0.851
CONS_SCORE:
0.2024
DSS_SCORE:
0.7177
HELIX:
0.1023
FCONS_SCORE:
1.0902
RIG_SCORE:
0.6232
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.E213G
TCGA-BP-4167
KIRC
TCGA
DSGVAST
DEG_SCF_TRCP1_1
0.1111
p.D221H
TCGA-CR-7398
HNSC
TCGA
DSGVAST
DEG_SCF_TRCP1_1
0.7688
p.E218D
TCGA-L9-A8F4
LUAD
TCGA
DSGVAST
DEG_SCF_TRCP1_1
0.25
p.R220H
DO233254
GACA
ICGC
DSGVAST
DEG_SCF_TRCP1_1
0.3056
p.S233I
DO229034
LICA
ICGC
DSGVAST
DEG_SCF_TRCP1_1
0.1667
p.C212Y
DO45189
LIRI
ICGC
DSGVAST
DEG_SCF_TRCP1_1
0.0833
p.P214S
DO48726
SKCM
ICGC
DSGVAST
DEG_SCF_TRCP1_1
0.1389
p.S233C
DO51289
SKCM
ICGC
DSGVAST
DEG_SCF_TRCP1_1
0.1667
p.L232I
DO229248
THCA
ICGC
DSGVAST
DEG_SCF_TRCP1_1
0.1944
p.S219F
DO43041
UCEC
ICGC
DSGVAST
DEG_SCF_TRCP1_1
0.2778
p.P236L
DO43891
UCEC
ICGC
DSGVAST
DEG_SCF_TRCP1_1
0.0833
p.S230G
SIDM00537
Colorectal Carcinoma
GDSC
DSGVAST
DEG_SCF_TRCP1_1
0.6944
p.S230G
GP5d
large_intestine
COSMIC
DSGVAST
DEG_SCF_TRCP1_1
0.6944
p.P233S
DBTRG-05MG
central_nervous_system
COSMIC
DSGVAST
DEG_SCF_TRCP1_1
0.1667
p.S212G
GP5d
large_intestine
COSMIC
DSGVAST
DEG_SCF_TRCP1_1
0.0833
p.S232G
EN
endometrium
COSMIC
DSGVAST
DEG_SCF_TRCP1_1
0.1944
Drug responses associated with GPHN mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of DSGVAST
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9NQX3
Gephyrin [Includes: Molybdopterin adenylyltransferase
DEG_SCF_TRCP1_1
221:227
DSGVAST
BTRC
0.9985
More...