DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
DSGVGS
Uniprot ID:
Q9Y2L9
Source protein:
Leucine-rich repeat and calponin homology domain-containing protein 1
Source gene:
LRCH1
Class:
DEG_SCF_TRCP1_1
Location:
322:327
E3 ligase:
BTRC
DEGRON score:
0.9624
ASA_SCORE:
42.95
COIL:
0.793
CONS_SCORE:
0.3405
DSS_SCORE:
0.6762
HELIX:
0.0613
FCONS_SCORE:
0.9951
RIG_SCORE:
0.5487
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.V314L
TCGA-22-4595
LUSC
TCGA
DSGVGS
DEG_SCF_TRCP1_1
0.1111
p.V314L
DO26641
LUSC
ICGC
DSGVGS
DEG_SCF_TRCP1_1
0.1111
p.S323L
TCGA-AP-A056
UCEC
TCGA
DSGVGS
DEG_SCF_TRCP1_1
0.7667
p.S323L
DO225346
BRCA
ICGC
DSGVGS
DEG_SCF_TRCP1_1
0.7667
p.S323L
DO43971
UCEC
ICGC
DSGVGS
DEG_SCF_TRCP1_1
0.7667
p.V314M
TCGA-BH-A0AW
BRCA
TCGA
DSGVGS
DEG_SCF_TRCP1_1
0.1111
p.V314M
DO5005
BRCA
ICGC
DSGVGS
DEG_SCF_TRCP1_1
0.1111
p.G326R
TCGA-DK-A2I4
BLCA
TCGA
DSGVGS
DEG_SCF_TRCP1_1
0.6457
p.G326R
DO465
BLCA
ICGC
DSGVGS
DEG_SCF_TRCP1_1
0.6457
p.D328G
DO45083
LINC
ICGC
DSGVGS
DEG_SCF_TRCP1_1
0.3056
p.D322N
SIDM01088
Endometrial Carcinoma
GDSC
DSGVGS
DEG_SCF_TRCP1_1
0.6932
p.D322N
ACH-000965
Endometrial/Uterine Cancer
CCLE
DSGVGS
DEG_SCF_TRCP1_1
0.6932
p.D322N
RL95-2
endometrium
COSMIC
DSGVGS
DEG_SCF_TRCP1_1
0.6932
Drug responses associated with LRCH1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of DSGVGS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9Y2L9
Leucine-rich repeat and calponin homology domain-containing protein 1
DEG_SCF_TRCP1_1
322:327
DSGVGS
BTRC
0.9624
More...