DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
DSGVSDS
Uniprot ID:
Q14137
Source protein:
Ribosome biogenesis protein BOP1
Source gene:
BOP1
Class:
DEG_SCF_TRCP1_1
Location:
49:55
E3 ligase:
BTRC
DEGRON score:
0.9833
ASA_SCORE:
80.4143
COIL:
0.9077
CONS_SCORE:
0.2615
DSS_SCORE:
0.773
HELIX:
0.0539
FCONS_SCORE:
0.9874
RIG_SCORE:
0.5514
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S48R
TCGA-69-7765
LUAD
TCGA
DSGVSDS
DEG_SCF_TRCP1_1
0.3056
p.S48R
DO23580
LUAD
ICGC
DSGVSDS
DEG_SCF_TRCP1_1
0.3056
p.G47S
TCGA-BR-8361
STAD
TCGA
DSGVSDS
DEG_SCF_TRCP1_1
0.2778
p.G47S
DO48032
STAD
ICGC
DSGVSDS
DEG_SCF_TRCP1_1
0.2778
p.S53C
TCGA-C4-A0F7
BLCA
TCGA
DSGVSDS
DEG_SCF_TRCP1_1
0.643
p.V52I
TCGA-CM-6162
COAD
TCGA
DSGVSDS
DEG_SCF_TRCP1_1
0.5965
p.V52I
DO8479
COAD
ICGC
DSGVSDS
DEG_SCF_TRCP1_1
0.5965
p.V52I
DO23328
LINC
ICGC
DSGVSDS
DEG_SCF_TRCP1_1
0.5965
p.S53F
TCGA-DA-A95Z
SKCM
TCGA
DSGVSDS
DEG_SCF_TRCP1_1
0.6871
p.S53F
DO219481
SKCM
ICGC
DSGVSDS
DEG_SCF_TRCP1_1
0.6871
p.T62I
ACH-000140
Lymphoma
CCLE
DSGVSDS
DEG_SCF_TRCP1_1
0.1389
p.T62I
ACH-000571
Brain Cancer
CCLE
DSGVSDS
DEG_SCF_TRCP1_1
0.1389
p.T62I
ACH-000931
Skin Cancer
CCLE
DSGVSDS
DEG_SCF_TRCP1_1
0.1389
Drug responses associated with BOP1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of DSGVSDS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q14137
Ribosome biogenesis protein BOP1
DEG_SCF_TRCP1_1
49:55
DSGVSDS
BTRC
0.9833
More...