DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
DSGVSPT
Uniprot ID:
Q86YN6
Source protein:
Peroxisome proliferator-activated receptor gamma coactivator 1-beta
Source gene:
PPARGC1B
Class:
DEG_SCF_TRCP1_1
Location:
824:830
E3 ligase:
BTRC
DEGRON score:
0.9242
ASA_SCORE:
80.0429
COIL:
0.924
CONS_SCORE:
0.4481
DSS_SCORE:
0.8222
HELIX:
0.0659
FCONS_SCORE:
0.9277
RIG_SCORE:
0.5649
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S832C
TCGA-05-4250
LUAD
TCGA
DSGVSPT
DEG_SCF_TRCP1_1
0.2778
p.S832C
DO24457
LUAD
ICGC
DSGVSPT
DEG_SCF_TRCP1_1
0.2778
p.D819Y
TCGA-A8-A0A7
BRCA
TCGA
DSGVSPT
DEG_SCF_TRCP1_1
0.1944
p.D833N
TCGA-DD-AACU
LIHC
TCGA
DSGVSPT
DEG_SCF_TRCP1_1
0.25
p.A826T
DO233731
GACA
ICGC
DSGVSPT
DEG_SCF_TRCP1_1
0.7139
p.R830W
DO14067
GBM
ICGC
DSGVSPT
DEG_SCF_TRCP1_1
0.8634
p.R830W
KARPAS-45
haematopoietic_and_lymphoid_tissue
COSMIC
DSGVSPT
DEG_SCF_TRCP1_1
0.8634
p.R830W
NCI-SNU-1
stomach
COSMIC
DSGVSPT
DEG_SCF_TRCP1_1
0.8634
p.S817L
DO220851
MELA
ICGC
DSGVSPT
DEG_SCF_TRCP1_1
0.1389
p.T820M
DO42713
UCEC
ICGC
DSGVSPT
DEG_SCF_TRCP1_1
0.2222
p.D820N
SIDM00935
Other Solid Cancers
GDSC
DSGVSPT
DEG_SCF_TRCP1_1
0.2222
p.D820N
CAL-39
vulva
COSMIC
DSGVSPT
DEG_SCF_TRCP1_1
0.2222
p.H834Y
SIDM01454
Kidney Carcinoma
GDSC
DSGVSPT
DEG_SCF_TRCP1_1
0.2222
p.H834Y
ACH-000459
Kidney Cancer
CCLE
DSGVSPT
DEG_SCF_TRCP1_1
0.2222
p.A833T
MN-60
haematopoietic_and_lymphoid_tissue
COSMIC
DSGVSPT
DEG_SCF_TRCP1_1
0.25
p.G826E
KARPAS-45
haematopoietic_and_lymphoid_tissue
COSMIC
DSGVSPT
DEG_SCF_TRCP1_1
0.7199
p.I823V
NCI-H82
lung
COSMIC
DSGVSPT
DEG_SCF_TRCP1_1
0.3056
Drug responses associated with PPARGC1B mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of DSGVSPT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q86YN6
Peroxisome proliferator-activated receptor gamma coactivator 1-beta
DEG_SCF_TRCP1_1
824:830
DSGVSPT
BTRC
0.9242
More...