DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
DSGVSS
Uniprot ID:
O43347
Source protein:
RNA-binding protein Musashi homolog 1
Source gene:
MSI1
Class:
DEG_SCF_TRCP1_1
Location:
326:331
E3 ligase:
BTRC
DEGRON score:
0.7151
ASA_SCORE:
43.8667
COIL:
0.8362
CONS_SCORE:
0.3774
DSS_SCORE:
0.3357
HELIX:
0.12
FCONS_SCORE:
0.8614
RIG_SCORE:
0.6992
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S327L
TCGA-CG-4460
STAD
TCGA
DSGVSS
DEG_SCF_TRCP1_1
0.7667
p.S327L
DO38427
STAD
ICGC
DSGVSS
DEG_SCF_TRCP1_1
0.7667
p.A335V
TCGA-FI-A2D0
UCEC
TCGA
DSGVSS
DEG_SCF_TRCP1_1
0.2222
p.A335V
DO43891
UCEC
ICGC
DSGVSS
DEG_SCF_TRCP1_1
0.2222
p.D326G
DO233807
GACA
ICGC
DSGVSS
DEG_SCF_TRCP1_1
0.7198
p.Y320C
DO229151
THCA
ICGC
DSGVSS
DEG_SCF_TRCP1_1
0.1667
p.A323T
DO229211
THCA
ICGC
DSGVSS
DEG_SCF_TRCP1_1
0.25
p.S331R
SIDM02039
Colorectal Carcinoma
GDSC
DSGVSS
DEG_SCF_TRCP1_1
0.7427
p.S330N
SIDM01943
Colorectal Carcinoma
GDSC
DSGVSS
DEG_SCF_TRCP1_1
0.5958
p.G321V
SIDM00048
Non-Small Cell Lung Carcinoma
GDSC
DSGVSS
DEG_SCF_TRCP1_1
0.1944
p.G321V
EMC-BAC-1
lung
COSMIC
DSGVSS
DEG_SCF_TRCP1_1
0.1944
p.G321R
SIDM00048
Non-Small Cell Lung Carcinoma
GDSC
DSGVSS
DEG_SCF_TRCP1_1
0.1944
p.G321R
EMC-BAC-1
lung
COSMIC
DSGVSS
DEG_SCF_TRCP1_1
0.1944
p.A322V
ACH-001498
Lymphoma
CCLE
DSGVSS
DEG_SCF_TRCP1_1
0.2222
Drug responses associated with MSI1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of DSGVSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O43347
RNA-binding protein Musashi homolog 1
DEG_SCF_TRCP1_1
326:331
DSGVSS
BTRC
0.7151
More...