DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
DSGYKVS
Uniprot ID:
Q16649
Source protein:
Nuclear factor interleukin-3-regulated protein
Source gene:
NFIL3
Class:
DEG_SCF_TRCP1_1
Location:
420:426
E3 ligase:
BTRC
DEGRON score:
0.9927
ASA_SCORE:
77.0857
COIL:
0.8113
CONS_SCORE:
0.4357
DSS_SCORE:
0.3454
HELIX:
0.0771
FCONS_SCORE:
1.0007
RIG_SCORE:
0.7449
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.D427V
TCGA-12-1089
GBM
TCGA
DSGYKVS
DEG_SCF_TRCP1_1
0.3056
p.D427V
DO12346
GBM
ICGC
DSGYKVS
DEG_SCF_TRCP1_1
0.3056
p.M418L
TCGA-55-8621
LUAD
TCGA
DSGYKVS
DEG_SCF_TRCP1_1
0.2778
p.M418L
DO25406
LUAD
ICGC
DSGYKVS
DEG_SCF_TRCP1_1
0.2778
p.E429D
TCGA-AN-A046
BRCA
TCGA
DSGYKVS
DEG_SCF_TRCP1_1
0.25
p.E429D
DO1285
BRCA
ICGC
DSGYKVS
DEG_SCF_TRCP1_1
0.25
p.Y432C
TCGA-UF-A7JF
HNSC
TCGA
DSGYKVS
DEG_SCF_TRCP1_1
0.1667
p.Y432C
DO52116
HNSC
ICGC
DSGYKVS
DEG_SCF_TRCP1_1
0.1667
p.V425D
ACH-002289
Leukemia
CCLE
DSGYKVS
DEG_SCF_TRCP1_1
0.6674
p.V425D
NK-92MI
haematopoietic_and_lymphoid_tissue
COSMIC
DSGYKVS
DEG_SCF_TRCP1_1
0.6674
Drug responses associated with NFIL3 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of DSGYKVS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q16649
Nuclear factor interleukin-3-regulated protein
DEG_SCF_TRCP1_1
420:426
DSGYKVS
BTRC
0.9927
More...