DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
DSHPSYTDTP
Uniprot ID:
P48443
Source protein:
Retinoic acid receptor RXR-gamma
Source gene:
RXRG
Class:
CBL_PTK
Location:
40:49
E3 ligase:
CBL
DEGRON score:
0.9973
ASA_SCORE:
76.37
COIL:
0.9065
CONS_SCORE:
0.475
DSS_SCORE:
0.6079
HELIX:
0.0265
FCONS_SCORE:
1.1165
RIG_SCORE:
0.6326
Degron related mutations and impact score
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Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.D40Y
TCGA-EO-A3AV
UCEC
TCGA
DSHPSYTDTP
CBL_PTK
0.7325
p.D40Y
DO52412
UCEC
ICGC
DSHPSYTDTP
CBL_PTK
0.7325
p.T46A
TCGA-BS-A0UF
UCEC
TCGA
DSHPSYTDTP
CBL_PTK
0.7139
p.T46A
DO41488
UCEC
ICGC
DSHPSYTDTP
CBL_PTK
0.7139
p.T48N
TCGA-CN-6992
HNSC
TCGA
DSHPSYTDTP
CBL_PTK
0.5944
p.T48N
DO14606
HNSC
ICGC
DSHPSYTDTP
CBL_PTK
0.5944
p.D47N
TCGA-GN-A266
SKCM
TCGA
DSHPSYTDTP
CBL_PTK
0.5821
p.D47N
DO37432
SKCM
ICGC
DSHPSYTDTP
CBL_PTK
0.5821
p.D47E
TCGA-CS-6665
LGG
TCGA
DSHPSYTDTP
CBL_PTK
0.5647
p.D47E
DO22287
LGG
ICGC
DSHPSYTDTP
CBL_PTK
0.5647
p.F39L
HCC2998
large_intestine
COSMIC
DSHPSYTDTP
CBL_PTK
0.3056
p.P38R
DO45037
LINC
ICGC
DSHPSYTDTP
CBL_PTK
0.2778
p.P38A
SIDM00878
Breast Carcinoma
GDSC
DSHPSYTDTP
CBL_PTK
0.2778
p.P38A
ACH-000930
Breast Cancer
CCLE
DSHPSYTDTP
CBL_PTK
0.2778
p.P38A
HCC1569
breast
COSMIC
DSHPSYTDTP
CBL_PTK
0.2778
p.P38S
SIDM01146
Gastric Carcinoma
GDSC
DSHPSYTDTP
CBL_PTK
0.2778
p.P38S
ACH-000932
Gastric Cancer
CCLE
DSHPSYTDTP
CBL_PTK
0.2778
p.P38S
NCI-SNU-1
stomach
COSMIC
DSHPSYTDTP
CBL_PTK
0.2778
p.P53R
TCGA-CR-6487
HNSC
TCGA
DSHPSYTDTP
CBL_PTK
0.2222
p.P53R
DO15527
HNSC
ICGC
DSHPSYTDTP
CBL_PTK
0.2222
p.G36E
DO219878
SKCA
ICGC
DSHPSYTDTP
CBL_PTK
0.2222
p.R54Q
TCGA-A5-A1OF
UCEC
TCGA
DSHPSYTDTP
CBL_PTK
0.1944
p.R54Q
TCGA-BR-4361
STAD
TCGA
DSHPSYTDTP
CBL_PTK
0.1944
p.R54Q
TCGA-D9-A6EA
SKCM
TCGA
DSHPSYTDTP
CBL_PTK
0.1944
p.R54Q
DO50290
SKCM
ICGC
DSHPSYTDTP
CBL_PTK
0.1944
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Drug responses associated with RXRG mutations
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Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
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All proteins holding degron of DSHPSYTDTP
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Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P48443
Retinoic acid receptor RXR-gamma
CBL_PTK
40:49
DSHPSYTDTP
CBL
0.9973
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