DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
DSHPSYTDTP
Uniprot ID:
P48443
Source protein:
Retinoic acid receptor RXR-gamma
Source gene:
RXRG
Class:
CBL_PTK
Location:
40:49
E3 ligase:
CBL
DEGRON score:
0.9973
ASA_SCORE:
76.37
COIL:
0.9065
CONS_SCORE:
0.475
DSS_SCORE:
0.6079
HELIX:
0.0265
FCONS_SCORE:
1.1165
RIG_SCORE:
0.6326
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.A31E
TCGA-43-6143
LUSC
TCGA
DSHPSYTDTP
CBL_PTK
0.0833
p.A31E
DO26428
LUSC
ICGC
DSHPSYTDTP
CBL_PTK
0.0833
p.R54Q
TCGA-A5-A1OF
UCEC
TCGA
DSHPSYTDTP
CBL_PTK
0.1944
p.R54Q
TCGA-BR-4361
STAD
TCGA
DSHPSYTDTP
CBL_PTK
0.1944
p.R54Q
TCGA-D9-A6EA
SKCM
TCGA
DSHPSYTDTP
CBL_PTK
0.1944
p.R54Q
DO50290
SKCM
ICGC
DSHPSYTDTP
CBL_PTK
0.1944
p.R54Q
DO38887
STAD
ICGC
DSHPSYTDTP
CBL_PTK
0.1944
p.R54Q
DO42568
UCEC
ICGC
DSHPSYTDTP
CBL_PTK
0.1944
p.T46A
TCGA-BS-A0UF
UCEC
TCGA
DSHPSYTDTP
CBL_PTK
0.7139
p.T46A
DO41488
UCEC
ICGC
DSHPSYTDTP
CBL_PTK
0.7139
p.T48N
TCGA-CN-6992
HNSC
TCGA
DSHPSYTDTP
CBL_PTK
0.5944
p.T48N
DO14606
HNSC
ICGC
DSHPSYTDTP
CBL_PTK
0.5944
p.P53R
TCGA-CR-6487
HNSC
TCGA
DSHPSYTDTP
CBL_PTK
0.2222
p.P53R
DO15527
HNSC
ICGC
DSHPSYTDTP
CBL_PTK
0.2222
p.D47E
TCGA-CS-6665
LGG
TCGA
DSHPSYTDTP
CBL_PTK
0.5647
p.D47E
DO22287
LGG
ICGC
DSHPSYTDTP
CBL_PTK
0.5647
p.D40Y
TCGA-EO-A3AV
UCEC
TCGA
DSHPSYTDTP
CBL_PTK
0.7325
p.D40Y
DO52412
UCEC
ICGC
DSHPSYTDTP
CBL_PTK
0.7325
p.D47N
TCGA-GN-A266
SKCM
TCGA
DSHPSYTDTP
CBL_PTK
0.5821
p.D47N
DO37432
SKCM
ICGC
DSHPSYTDTP
CBL_PTK
0.5821
p.T55I
DO50444
ESAD
ICGC
DSHPSYTDTP
CBL_PTK
0.1667
p.P38R
DO45037
LINC
ICGC
DSHPSYTDTP
CBL_PTK
0.2778
p.G36E
DO219878
SKCA
ICGC
DSHPSYTDTP
CBL_PTK
0.2222
p.S30L
SIDM00798
Rhabdomyosarcoma
GDSC
DSHPSYTDTP
CBL_PTK
0.0556
p.S30L
ACH-000201
Rhabdoid
CCLE
DSHPSYTDTP
CBL_PTK
0.0556
p.S30L
ACH-001212
Rhabdoid
CCLE
DSHPSYTDTP
CBL_PTK
0.0556
p.S30L
A204
soft_tissue
COSMIC
DSHPSYTDTP
CBL_PTK
0.0556
p.P38A
SIDM00878
Breast Carcinoma
GDSC
DSHPSYTDTP
CBL_PTK
0.2778
p.P38A
ACH-000930
Breast Cancer
CCLE
DSHPSYTDTP
CBL_PTK
0.2778
p.P38A
HCC1569
breast
COSMIC
DSHPSYTDTP
CBL_PTK
0.2778
p.P38S
SIDM01146
Gastric Carcinoma
GDSC
DSHPSYTDTP
CBL_PTK
0.2778
p.P38S
ACH-000932
Gastric Cancer
CCLE
DSHPSYTDTP
CBL_PTK
0.2778
p.P38S
NCI-SNU-1
stomach
COSMIC
DSHPSYTDTP
CBL_PTK
0.2778
p.S57N
SIDM00989
Bladder Carcinoma
GDSC
DSHPSYTDTP
CBL_PTK
0.1111
p.S57N
ACH-000802
Bladder Cancer
CCLE
DSHPSYTDTP
CBL_PTK
0.1111
p.S57N
BFTC-905
urinary_tract
COSMIC
DSHPSYTDTP
CBL_PTK
0.1111
p.A58E
SIDM00162
Biliary Tract Carcinoma
GDSC
DSHPSYTDTP
CBL_PTK
0.0833
p.A58E
ACH-000268
Bile Duct Cancer
CCLE
DSHPSYTDTP
CBL_PTK
0.0833
p.E34K
ChaGo-K-1
lung
COSMIC
DSHPSYTDTP
CBL_PTK
0.1667
p.F39L
HCC2998
large_intestine
COSMIC
DSHPSYTDTP
CBL_PTK
0.3056
Drug responses associated with RXRG mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of DSHPSYTDTP
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P48443
Retinoic acid receptor RXR-gamma
CBL_PTK
40:49
DSHPSYTDTP
CBL
0.9973
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