DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
DSSPSEVPEGV
Uniprot ID:
Q9UPX8
Source protein:
SH3 and multiple ankyrin repeat domains protein 2
Source gene:
SHANK2
Class:
DEG_COP1_1
Location:
963:973
E3 ligase:
COP1
DEGRON score:
0.8465
ASA_SCORE:
88.4818
COIL:
0.9612
CONS_SCORE:
0.2543
DSS_SCORE:
0.7582
HELIX:
0.0195
FCONS_SCORE:
0.9076
RIG_SCORE:
0.5749
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R959P
TCGA-28-1757
GBM
TCGA
DSSPSEVPEGV
DEG_COP1_1
0.2222
p.R959P
DO12166
GBM
ICGC
DSSPSEVPEGV
DEG_COP1_1
0.2222
p.R959C
TCGA-B5-A3FA
UCEC
TCGA
DSSPSEVPEGV
DEG_COP1_1
0.2222
p.R959C
DO52402
UCEC
ICGC
DSSPSEVPEGV
DEG_COP1_1
0.2222
p.F978V
TCGA-BA-6868
HNSC
TCGA
DSSPSEVPEGV
DEG_COP1_1
0.1944
p.F978V
DO14184
HNSC
ICGC
DSSPSEVPEGV
DEG_COP1_1
0.1944
p.R979C
TCGA-EB-A5UN
SKCM
TCGA
DSSPSEVPEGV
DEG_COP1_1
0.1667
p.R979C
TCGA-EE-A2MR
SKCM
TCGA
DSSPSEVPEGV
DEG_COP1_1
0.1667
p.R979C
DO47267
SKCM
ICGC
DSSPSEVPEGV
DEG_COP1_1
0.1667
p.R979C
DO37819
SKCM
ICGC
DSSPSEVPEGV
DEG_COP1_1
0.1667
p.A976S
TCGA-EI-6507
READ
TCGA
DSSPSEVPEGV
DEG_COP1_1
0.25
p.A976S
DO36675
READ
ICGC
DSSPSEVPEGV
DEG_COP1_1
0.25
p.S961F
TCGA-FS-A1ZK
SKCM
TCGA
DSSPSEVPEGV
DEG_COP1_1
0.2778
p.S961F
DO37474
SKCM
ICGC
DSSPSEVPEGV
DEG_COP1_1
0.2778
p.R979H
TCGA-XK-AAIW
PRAD
TCGA
DSSPSEVPEGV
DEG_COP1_1
0.1667
p.R979H
DO51407
PRAD
ICGC
DSSPSEVPEGV
DEG_COP1_1
0.1667
p.Y968F
DO228202
LICA
ICGC
DSSPSEVPEGV
DEG_COP1_1
0.7528
p.R959S
DO228952
LICA
ICGC
DSSPSEVPEGV
DEG_COP1_1
0.2222
p.L957M
DO229022
LICA
ICGC
DSSPSEVPEGV
DEG_COP1_1
0.1667
p.Y968C
DO230550
LUSC
ICGC
DSSPSEVPEGV
DEG_COP1_1
0.7087
p.N971D
DO35553
PBCA
ICGC
DSSPSEVPEGV
DEG_COP1_1
0.6932
p.R955G
DO51964
PRAD
ICGC
DSSPSEVPEGV
DEG_COP1_1
0.2222
p.P983L
ACH-002343
Non-Cancerous
CCLE
DSSPSEVPEGV
DEG_COP1_1
0.0556
Drug responses associated with SHANK2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of DSSPSEVPEGV
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9UPX8
SH3 and multiple ankyrin repeat domains protein 2
DEG_COP1_1
963:973
DSSPSEVPEGV
COP1
0.8465
More...